Re: AMBER: parameters for fluorine atom

From: Carlos Simmerling <carlos.ilion.bio.sunysb.edu>
Date: Thu, 15 Dec 2005 07:47:20 -0500

look in locmem.f

Morena Spreafico wrote:

> Dear Amber community,
>
> I would like to add parameters for F atom, by hand editing parameters
> in the file code mdread.f, in order to perform MM-PBSA analysis.
>
> Unfortunately I don't find the definition of parameters:
> x(L165-1+i)
> x(L170-1+i)
> x(L175-1+i)
> x(L180-1+i)
> x(L185-1+i)
> what do they represent? where to find this information?
>
> does anyone already add parameters for fluorine atom?
>
> I couldn't find this in the past messages in the mailing list.
>
> Thank you
>
> Morena
>
>
> -------------------------------------------------
> Morena Spreafico
>
> Institute of Molecular Pharmacy
> Pharmacenter
> University of Basel
> Klingelbergstrasse 50
> CH-4056 Basel
> Tel: +41 61 267 15 03
> morena.spreafico.stud.unibas.ch
>
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Received on Thu Dec 15 2005 - 12:53:01 PST
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