did you space them according to system size?
Peng Tao wrote:
> I made this temperature spacing according to YujiSugitaa,YukoOkamoto's
> article: Chemical Physics Letters 314, (1999), 141–151
> Replica-exchange molecular dynamics method for protein folding.
> Their temperatures for REMD distribute exponentially. That's why my
> temperatures are far away from each other above 400K.
>
> I will set new temperatures more closer to each other, and rerun my
> simulations.
>
> Thanks for help.
>
> Best regards,
> Peng Tao
>
>
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Mon Dec 19 2005 - 02:53:02 PST