Amber Archive Dec 2014 by messages with attachments

Re: [AMBER] Problem with triangular point in parameter file Jorgen Simonsen (Mon Dec 01 2014 - 15:20:59 PST)
1. debug.frcmod (5908 bytes)
2. debug.pdb (395 bytes)
3. octa.frcmod (5908 bytes)
4. octa.library (1978 bytes)
5. debug.library (1661 bytes)
[AMBER] Problems with amber14 intallation in parallel Dailin Li (Mon Dec 01 2014 - 17:39:58 PST)
1. 12-01_11-07-58.diff (12497 bytes)
2. 12-01_11-07-58.log (27146 bytes)
3. 12-01_09-39-20.log (209952 bytes)
4. at_summary (195 bytes)
[AMBER] Linker Attached to DNA Brittany Boykin (Tue Dec 02 2014 - 13:58:41 PST)
1. DNA_linker_complex.jpg (34914 bytes)
2. no-phos.jpg (36074 bytes)
3. with-phosphates.png (224571 bytes)
4. polyA.png (316665 bytes)
[AMBER] xleap segmentation fault when removing residues Mickey Richards (Thu Dec 04 2014 - 15:03:42 PST)
1. leap.log.2 (31316 bytes)
2. leap.log.3 (25876 bytes)
3. monomer.1.pdb (49367 bytes)
4. monomer.2.pdb (49370 bytes)
[AMBER] Problems with amber14 intallation in parallel Dailin Li (Sat Dec 06 2014 - 17:42:10 PST)
1. Problems_with_amber14_intallation_in_parallel.doc (107008 bytes)
2. 12-01_11-07-58.diff (12497 bytes)
3. 12-01_11-07-58.log (27146 bytes)
4. 12-01_09-39-20.log (209952 bytes)
5. at_summary (195 bytes)
[AMBER] TLEAP issues Wong, Sook (NIH/NCATS) [V] (Tue Dec 09 2014 - 13:59:01 PST)
1. com.pdb (203671 bytes)
2. log (22981 bytes)
Re: [AMBER] AmberTools suppose program David A Case (Tue Dec 09 2014 - 18:56:18 PST)
1. suppose.nab (12163 bytes)
[AMBER] another segfault with sander14 and TI/softcore Hannes Loeffler (Wed Dec 10 2014 - 02:04:48 PST)
1. sander14_TI_sc_segfault.tar.gz (2334 bytes)
[AMBER] MMPBSA-ERROR for firstmolecule-dna Abhishek TYAGI (Wed Dec 10 2014 - 19:05:46 PST)
1. _MMPBSA_complex_gb.mdout.0 (5457 bytes)
[AMBER] Problem with simulation of protein-DNA complex Aditya Sarkar (Fri Dec 12 2014 - 00:49:20 PST)
1. 12-12_03:14:01.png (77809 bytes)
Re: [AMBER] PCA 2dprojection with xtal data and energy information BERGY (Sat Dec 13 2014 - 18:45:17 PST)
1. pca.png (27273 bytes)
Re: [AMBER] MMPBSA-ERROR for firstmolecule-dna Abhishek TYAGI (Mon Dec 15 2014 - 03:03:41 PST)
1. _MMPBSA_receptor_pb.mdout.0 (168912 bytes)
Re: [AMBER] Error in Box Dimension 杨川 (Mon Dec 15 2014 - 21:15:43 PST)
1. min0.in (174 bytes)
2. min1.in (128 bytes)
3. heat.in (286 bytes)
4. md1.in (309 bytes)
[AMBER] Fwd: RED-III.52-Tools stopped to work suddenly. Zeinab Emami (Tue Dec 16 2014 - 03:05:19 PST)
1. error.png (162047 bytes)
2. 3-error.png (153921 bytes)
3. III.5.pdf (253217 bytes)
Re: [AMBER] MMPBSA-ERROR for firstmolecule-dna Abhishek TYAGI (Tue Dec 16 2014 - 19:56:30 PST)
1. _MMPBSA_receptor_pb.mdout.0 (168912 bytes)
Re: [AMBER] another segfault with sander14 and TI/softcore Hannes Loeffler (Wed Dec 17 2014 - 06:46:19 PST)
1. nscm.tar.gz (2687 bytes)
[AMBER] Free Energy Workshop, Münster, March 9-11, 2015 Vlad Cojocaru (Fri Dec 19 2014 - 04:58:42 PST)
1. FEW2015_Muenster_Poster_Compressed.pdf (314474 bytes)

Last message date: Wed Dec 31 2014 - 17:30:03 PST
Archived on: Wed Dec 25 2024 - 05:55:03 PST

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