[AMBER] TLEAP issues

From: Wong, Sook (NIH/NCATS) [V] <"Wong,>
Date: Tue, 9 Dec 2014 21:59:01 +0000

Hi,

I am trying to generate prmtop & inpcrd using tleap. However, I am encountering the following issues:
FATAL: Atom .R<LIG 393>.A<C1 1> does not have a type.
FATAL: Atom .R<LIG 393>.A<C2 2> does not have a type.
FATAL: Atom .R<LIG 393>.A<C3 3> does not have a type.
FATAL: Atom .R<LIG 393>.A<C4 4> does not have a type.
FATAL: Atom .R<LIG 393>.A<C5 5> does not have a type.
FATAL: Atom .R<LIG 393>.A<C6 6> does not have a type.
FATAL: Atom .R<LIG 393>.A<C7 7> does not have a type.
FATAL: Atom .R<LIG 393>.A<C8 8> does not have a type.
FATAL: Atom .R<LIG 393>.A<C9 9> does not have a type.
FATAL: Atom .R<LIG 393>.A<C10 10> does not have a type.
FATAL: Atom .R<LIG 393>.A<C11 11> does not have a type.
FATAL: Atom .R<LIG 393>.A<C12 12> does not have a type. Etc.

I have enclosed the log from tleap as well as my com.pdb. Can anyone advise the issue?

-Sook


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Received on Tue Dec 09 2014 - 14:00:03 PST
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