Amber Archive Sep 2001: By Thread

COORDINATE RESETTING Sanjeev B.S. (Sun Sep 02 2001 - 05:56:12 PDT)
error message Guanglei Cui (Mon Sep 03 2001 - 08:12:17 PDT)
peek_ewad_inpcrd Lakshmi P. Kotra (Mon Sep 03 2001 - 10:57:31 PDT)
- Re: peek_ewad_inpcrd schayg_at_puskin-a206.sote.hu (Tue Sep 04 2001 - 14:13:22 PDT)
  - Re: peek_ewad_inpcrd Sanjeev B.S. (Wed Sep 05 2001 - 00:07:10 PDT)
Program versoins Stephane (Wed Sep 05 2001 - 03:05:58 PDT)
Dist restraints + Belly Dyn Sanjeev B.S. (Thu Sep 06 2001 - 05:05:41 PDT)
library files in leap Michael G Cooney (Thu Sep 06 2001 - 12:35:15 PDT)
Unit of force constant Chigusa Kobayashi (Thu Sep 06 2001 - 13:23:14 PDT)
xleap crashing on sgi's Michael G Cooney (Thu Sep 06 2001 - 13:36:46 PDT)
Re: library files in leap Bill Ross (Thu Sep 06 2001 - 15:11:06 PDT)
Belly+Restraints Sanjeev B.S. (Fri Sep 07 2001 - 03:32:16 PDT)
Strange density behavior with tr. octahedral box and constant pressure Michael Jakusch (Fri Sep 07 2001 - 06:24:53 PDT)
ESS Workshop - Flexibility and Function of Proteins ess-ws_at_iwr.uni-heidelberg.de (Fri Sep 07 2001 - 07:04:57 PDT)
generalized born model on protein or peptide liz (Fri Sep 07 2001 - 09:43:02 PDT)
- Re: generalized born model on protein or peptide Andreas Svrcek-Seiler (Fri Sep 07 2001 - 12:39:27 PDT)
- parameter regarding S-O Shixiang Yan (Fri Sep 07 2001 - 14:32:25 PDT)
- hydorgen bond life time thenmalar rathinavelan (Fri Sep 07 2001 - 21:14:18 PDT)
- Result: Dist restraints + Belly Sanjeev B.S. (Sat Sep 08 2001 - 04:24:37 PDT)
- MD run with constantly decreasing total energy Sue Heavner (Sat Sep 08 2001 - 15:00:25 PDT)
- partial solvation using delphi Shixiang Yan (Sun Sep 09 2001 - 11:10:32 PDT)
- input parameter for amber5 Hungie Hungie (Mon Sep 10 2001 - 05:03:26 PDT)
  - Re: input parameter for amber5 Stephane (Mon Sep 10 2001 - 05:17:45 PDT)
  - Add electric field Long Hai (Mon Sep 10 2001 - 11:41:12 PDT)
    - how to write out ... Michal Otyepka (Thu Sep 13 2001 - 05:07:39 PDT)
  - a funny problem about output for sander_classic Shixiang Yan (Tue Sep 11 2001 - 14:12:13 PDT)
    - Problem with carnal ... Stephane (Thu Sep 13 2001 - 09:25:38 PDT)
    - Re: Problem with carnal ... Sanjeev B.S. (Thu Sep 13 2001 - 09:43:56 PDT)
    - Problem minimizing on SGI (SHOULD NOT BE HERE). Andrew Hoofnagle (Thu Sep 13 2001 - 10:37:05 PDT)
    - Re: Problem minimizing on SGI (SHOULD NOT BE HERE). Andrew Hoofnagle (Thu Sep 13 2001 - 13:39:29 PDT)
    - Problem with compilation of AMBER on IBM Power3 SP Eric Aubanel (Thu Sep 13 2001 - 13:05:50 PDT)
    - Re: Problem with compilation of AMBER on IBM Power3 SP Sanjeev B.S. (Thu Sep 13 2001 - 21:00:36 PDT)
    - Re: Problem with compilation of AMBER on IBM Power3 SP Nicolas Grima (Fri Sep 14 2001 - 02:20:27 PDT)
    - error Rozita Dara (Fri Sep 14 2001 - 09:07:07 PDT)
  - trajectory analysis Eoin Galligan (Wed Sep 12 2001 - 09:21:16 PDT)
  - energies for part of the protein Elizabeth K. White (Wed Sep 12 2001 - 15:21:10 PDT)
    - Re: energies for part of the protein jim caldwell (Wed Sep 12 2001 - 15:33:59 PDT)
- Re: generalized born model on protein or peptide Raik Grunberg (Mon Sep 10 2001 - 05:14:58 PDT)
problem with anal arnaud (Fri Sep 07 2001 - 09:47:24 PDT)
Re: energies for part of the protein Bill Ross (Wed Sep 12 2001 - 17:07:32 PDT)
Re: how to write out... F. Ryjacek (Fri Sep 14 2001 - 10:23:20 PDT)
(no subject) F. Ryjacek (Fri Sep 14 2001 - 10:34:41 PDT)
- analysis of the results Rozita Dara (Tue Sep 18 2001 - 08:56:07 PDT)
- esp with gamess-usB Uwe Richter (Wed Sep 19 2001 - 06:05:26 PDT)
- another error Rozita Dara (Wed Sep 19 2001 - 08:01:11 PDT)
- Gibbs, PME, DynModW, ISDX0, etc. Michael Jakusch (Thu Sep 20 2001 - 05:39:47 PDT)
  - Dual Athlon Stephane (Thu Sep 27 2001 - 01:38:09 PDT)
    - Re: Dual Athlon Chuck Schneider (Thu Sep 27 2001 - 04:12:06 PDT)
    - about pressure Nikolai Smolin (Thu Sep 27 2001 - 06:33:56 PDT)
    - (no subject) xin hu (Thu Sep 27 2001 - 21:27:27 PDT)
    - (no subject) Stephane (Fri Sep 28 2001 - 01:18:21 PDT)
    - P-N-parameters Christine Bathelt (Fri Sep 28 2001 - 06:15:36 PDT)
- Problem in GIBBS! PRADIPTA Bandyopadhyay (Thu Sep 20 2001 - 11:38:05 PDT)
- Segmentation fault (core dumped) Rozita Dara (Tue Sep 25 2001 - 19:31:30 PDT)
  - problem with xleap Rozita Dara (Wed Sep 26 2001 - 15:22:29 PDT)
    - problem with ambpdb Rozita Dara (Sun Sep 30 2001 - 09:16:24 PDT)
  - CMC/MD wentaofu (Wed Sep 26 2001 - 16:03:37 PDT)
- Perturbed internal coordinate parameters Michael Jakusch (Wed Sep 26 2001 - 12:40:36 PDT)
LAPACK required by Amber Eric Aubanel (Fri Sep 14 2001 - 11:49:46 PDT)
parameters Marcela Madrid (Fri Sep 14 2001 - 12:50:26 PDT)
- Re: parameters jim caldwell (Fri Sep 14 2001 - 14:35:10 PDT)
- compile leap nepenthes_at_vplaces.net (Mon Sep 17 2001 - 00:16:51 PDT)
Re: compile leap Bill Ross (Mon Sep 17 2001 - 00:28:12 PDT)
about radius of gyration Nikolai Smolin (Mon Sep 17 2001 - 07:49:10 PDT)
Re: about radius of gyration Bill Ross (Mon Sep 17 2001 - 09:14:53 PDT)
Ewald Bomb Marcela Madrid (Tue Sep 18 2001 - 06:29:23 PDT)
Re: restraints and type Bill Ross (Fri Sep 21 2001 - 08:41:15 PDT)
restraints and type Christine Bathelt (Fri Sep 21 2001 - 09:24:57 PDT)
limit in xleap Anton B. Guliaev (Fri Sep 21 2001 - 15:13:03 PDT)
Info about LEaP Paolo Daniele (Mon Sep 24 2001 - 08:21:39 PDT)
- Re: Info about LEaP David Konerding (Mon Sep 24 2001 - 08:29:16 PDT)
Re: starting MD from t=0 Sanjeev B.S. (Mon Sep 24 2001 - 09:30:07 PDT)
water model Jerry wu (Mon Sep 24 2001 - 17:23:33 PDT)
Re: water model Bill Ross (Mon Sep 24 2001 - 23:21:44 PDT)
chlorine parameters M ESTA Laurent (Tue Sep 25 2001 - 01:06:31 PDT)
(no subject) A.Madhumalar (Tue Sep 25 2001 - 03:36:46 PDT)
RESP demo files Michael G Cooney (Tue Sep 25 2001 - 09:05:09 PDT)
Re: Velocity information in CARNAL generated restart files Bill Ross (Tue Sep 25 2001 - 12:32:51 PDT)
Re: CMC/MD Bill Ross (Wed Sep 26 2001 - 17:34:45 PDT)

Amber Archive Sep 2001 By Thread