limit in xleap

From: Anton B. Guliaev <anton_at_vostok.lbl.gov>
Date: Fri 21 Sep 2001 15:13:03 -0700 (PDT)

Dear Amber Users:

Does the xleap have a limit for number of residues which can be used using the x =
loadpdb mine.pdb command? my system has more than 10000 residues, including
waters. For all waters with residues number number > 10000 I get this error message:
-- residue 10000: duplicate H1 atoms (total 10)
-- residue 10000: duplicate H2 atoms (total 10)
-- residue 10000: duplicate O atoms (total 10)
-- residue 10001: duplicate H1 atoms (total 10)
-- residue 10001: duplicate H2 atoms (total 10)
-- residue 10001: duplicate O atoms (total 10)
-- residue 10002: duplicate H1 atoms (total 10)
-- residue 10002: duplicate H2 atoms (total 10)
-- residue 10002: duplicate O atoms (total 10)
-- residue 10003: duplicate H1 atoms (total 10)
-- residue 10003: duplicate H2 atoms (total 10)
-- residue 10003: duplicate O atoms (total 10)
-- residue 10004: duplicate H1 atoms (total 10).......etc

Any suggestions?

thanks a lot,

Anton
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        * Anton B. Guliaev, Ph.D *
        * Life Sciences Division *
      _ * LBNL, Berkeley CA 94720 * _
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Received on Fri Sep 21 2001 - 15:13:03 PDT