Amber Archive Dec 2000: By Thread

Discover to AMBER trajectory utilities Mark Forster (Fri Dec 01 2000 - 02:30:31 PST)
- libcss for SP2 Sanjeev B.S. (Mon Dec 04 2000 - 04:38:56 PST)
- AMBER6 RESP arubin_at_unmc.edu (Mon Dec 04 2000 - 11:26:30 PST)
- Question about TEMP and PRESS on Sander AMBER 5.1 Ramon Garduno (Mon Dec 04 2000 - 19:39:24 PST)
Small Molecule Paramaterisation Simon Cross (Fri Dec 01 2000 - 02:46:28 PST)
question about using SUN machine for amber? wentaofu (Fri Dec 01 2000 - 07:06:00 PST)
Re: Restarting production runs Michael Cooney (Fri Dec 01 2000 - 09:21:07 PST)
removing rotation during MD Raik Gruenberg (Fri Dec 01 2000 - 09:43:42 PST)
- Re: removing rotation during MD Andreas Svrcek-Seiler (Mon Dec 04 2000 - 04:32:17 PST)
Parallelization on VPP700 for AMBER5 Minenosuke Matsutani (Sun Dec 03 2000 - 23:12:12 PST)
Re: minimization of many structures jim caldwell (Tue Dec 05 2000 - 06:55:07 PST)
Re: minimization of many structures Bill Ross (Tue Dec 05 2000 - 08:47:16 PST)
Re: MPI Sander on a 5 node SMP cluster David Konerding (Tue Dec 05 2000 - 12:52:36 PST)
intprt on gibbs Marcela Madrid (Tue Dec 05 2000 - 13:19:52 PST)
FW: INTPRT Craig Marhefka (Wed Dec 06 2000 - 07:04:22 PST)
Re: filter? jim caldwell (Wed Dec 06 2000 - 09:09:06 PST)
Monte-Carlo Andrew Aird (Wed Dec 06 2000 - 09:12:08 PST)
- Re: Monte-Carlo Jed Pitera (Thu Dec 07 2000 - 09:50:02 PST)
- Parm File MBDXISN2 (Thu Dec 07 2000 - 03:38:41 PST)
  - Re: Parm File jim caldwell (Thu Dec 07 2000 - 07:40:53 PST)
- run sander on shared memory sgi Shixiang Yan (Thu Dec 07 2000 - 11:48:41 PST)
- DEVIATION IS TOO LARGE Shixiang Yan (Fri Dec 08 2000 - 10:42:37 PST)
- QUESTION ABOUT SANDER Ramon Garduno (Fri Dec 08 2000 - 21:13:31 PST)
- sulfur parameters Cristina Dezi (Mon Dec 11 2000 - 12:39:16 PST)
- DNA flexibility Jithesh P.V (Mon Dec 11 2000 - 20:33:08 PST)
  - Re: DNA flexibility Filip Lankas (Tue Dec 12 2000 - 03:04:45 PST)
  - crd file input for ptraj Michael Cooney (Tue Dec 12 2000 - 09:02:37 PST)
  - frcmod file format in amber 6.0 Mathy Froeyen (Wed Dec 13 2000 - 01:01:04 PST)
- (no subject) danilosili (Tue Dec 12 2000 - 01:27:51 PST)
- (no subject) danilosili (Tue Dec 12 2000 - 01:27:57 PST)
Re: INTERNATIONAL PIANO MASTER CLASS 2001 Nelson Brito (Wed Dec 13 2000 - 02:17:35 PST)
reading in residues Eoin Galligan (Wed Dec 13 2000 - 09:12:51 PST)
Re: frcmod file format in amber 6.0 Bill Ross (Wed Dec 13 2000 - 09:57:27 PST)
Review a sample issue of the Journal of Applied Spectroscopy (eu20) Steve C. Franklin (Wed Dec 13 2000 - 18:31:17 PST)
Can I...? Tim Astley (Wed Dec 13 2000 - 20:38:31 PST)
MPI on SUN Sanjeev B.S. (Thu Dec 14 2000 - 04:00:29 PST)
Machine file.... Lalith Perera (Thu Dec 14 2000 - 06:27:31 PST)
where to specify parm98.dat + has AMBER been compiled on HP N-4000 complex Jake Isaacs (Thu Dec 14 2000 - 09:20:28 PST)
omit non-bonded energy in Amber 6 Pornthep Sompornpisut (Thu Dec 14 2000 - 13:12:55 PST)
- Re: omit non-bonded energy in Amber 6 Laurent Chiche (Fri Dec 15 2000 - 00:27:07 PST)
- sizes.h for sander Sanjeev B.S. (Sat Dec 16 2000 - 11:56:44 PST)
- EWALD BOMB Grzegorz Jezierski (Mon Dec 18 2000 - 07:53:12 PST)
  - Re: EWALD BOMB darden (Mon Dec 18 2000 - 15:20:43 PST)
    - One question about praj ZhiYong Zhang (Mon Dec 18 2000 - 19:59:14 PST)
    - Re: One question about praj Pascal Bonnet (Tue Dec 19 2000 - 09:32:32 PST)
    - one question Zhangxd (Tue Dec 19 2000 - 07:44:47 PST)
    - pdbgen Olga Carvalho (Tue Dec 19 2000 - 02:52:52 PST)
    - Re: pdbgen Achintya Das (Tue Dec 19 2000 - 06:21:11 PST)
    - restraints + potential Eoin Galligan (Tue Dec 19 2000 - 04:22:35 PST)
- initial density generated by solvatebox Jake Isaacs (Mon Dec 18 2000 - 08:42:23 PST)
Re: initial density generated by solvatebox Bill Ross (Mon Dec 18 2000 - 09:23:04 PST)
1-4 interactions Andrew Petersen (Mon Dec 18 2000 - 12:33:24 PST)
RST file for non-standard residue arubin_at_unmc.edu (Mon Dec 18 2000 - 14:08:40 PST)
PostDoc Position available Ronald Kuehne (Wed Dec 20 2000 - 00:57:15 PST)
water and ions Prem Raj Joseph (Thu Dec 21 2000 - 08:12:53 PST)
- hi Zhangxd (Thu Dec 21 2000 - 13:22:50 PST)
Brazilian Symposium on Medicinal Chemistry Carlos Montanari (Thu Dec 21 2000 - 09:01:05 PST)
Re: Saving coordinates with sander_classic Michael Cooney (Thu Dec 21 2000 - 13:34:34 PST)
ibelly Joseph Nachman (Thu Dec 21 2000 - 14:37:25 PST)
- froce field parameters Christian Pilger (Fri Dec 22 2000 - 09:31:16 PST)
  - Re: CCL:froce field parameters xin_hu (Fri Dec 22 2000 - 10:05:09 PST)
    - question Zhangxd (Fri Dec 22 2000 - 12:16:15 PST)
    - compile error Margaret Cheung (Sun Dec 24 2000 - 02:23:50 PST)
    - about defining disulfide bond shuji ichikawa (Tue Dec 26 2000 - 06:10:24 PST)
    - about temperture Zhangxd (Thu Dec 28 2000 - 11:52:13 PST)
    - Request for using AMBER server deborah buam (Tue Dec 26 2000 - 09:15:32 PST)
Configuring AMBER program deborah buam (Fri Dec 22 2000 - 08:41:15 PST)
Re: CCL:AMBER6 and MPICH David Case (Fri Dec 29 2000 - 09:56:24 PST)
- Re: CCL:AMBER6 and MPICH David Konerding (Sat Dec 30 2000 - 21:44:00 PST)

Amber Archive Dec 2000 By Thread