Amber Archive May 2000 by author

66 messages: Starting Mon May 01 2000 - 09:17:11 PDT, Ending Wed May 31 2000 - 19:27:34 PDT
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A.Madhumalar
- Re: DOUBT IN AMBER5 PTRAJ DOCUMENTATION (fwd) (Wed May 24 2000 - 03:53:32 PDT)
- Re: DOUBT IN PTRAJ DOCUMENTATION (Wed May 24 2000 - 00:05:12 PDT)
Alan Cheng
- protonated adenine and cytosine? (Mon May 08 2000 - 20:09:40 PDT)
Aleksandras Gutmanas
- Side chain mobility (Thu May 04 2000 - 08:28:13 PDT)
Bill Ross
- Re: Crosslink in Leap (Tue May 23 2000 - 22:28:37 PDT)
- Re: problems in sander (Sun May 07 2000 - 01:54:57 PDT)
Cristina Dezi
- soft repulsion option (Fri May 26 2000 - 01:15:01 PDT)
Cui Guanglei
- md toolchest (Wed May 31 2000 - 10:16:32 PDT)
David Case
- Re: Help with polynucleotide building (Wed May 24 2000 - 15:53:24 PDT)
- [pavan.bnpi.com: 'Coordinate resetting in amber6'] (Wed May 17 2000 - 15:08:18 PDT)
- Re: Hello (Wed May 17 2000 - 07:43:47 PDT)
David Konerding
- Re: 4096wat running problem (Fri May 26 2000 - 08:02:18 PDT)
- Re: Sander: crash if nmropt=1. HELP!!!!!!! (Tue May 23 2000 - 10:33:20 PDT)
Dayle Smith
- anions of NAB's (Mon May 01 2000 - 09:17:11 PDT)
devi rvel
- problems in sander (Sun May 07 2000 - 00:53:52 PDT)
Fabio Arnesano
- AMBER 6 and residual dipolar coupling (Wed May 10 2000 - 01:36:25 PDT)
Francesca Mocci
- transition metal ions parameters (Thu May 04 2000 - 07:46:45 PDT)
Frank Yan
- rms in rdparm (Wed May 31 2000 - 15:38:51 PDT)
Fran�ois Yves Dupradeau
- babel (Mon May 08 2000 - 04:06:51 PDT)
Friedrich A. Gollmick
- d-uridine (Fri May 12 2000 - 03:17:41 PDT)
Garrett W Grahek
- Visualization (Wed May 31 2000 - 16:50:57 PDT)
Gerard GIL
- AMBER 6.0 on parallel IBM SP system. (Tue May 30 2000 - 07:09:07 PDT)
HIRAO
- ROAR-CP calculation on axp machines (Tue May 30 2000 - 19:23:02 PDT)
Jarrod Smith
- Re: a6 sander gb breaks on smallmol (Thu May 11 2000 - 15:42:03 PDT)
Jeffrey P. Jones
- Crosslink in Leap (Tue May 23 2000 - 12:15:06 PDT)
Jes�s G�mez
- equilibration of CH2Cl2 box (Thu May 18 2000 - 05:30:32 PDT)
jim caldwell
- Re: Periodic boundary condition (Fri May 26 2000 - 10:28:50 PDT)
- Amber6 documentation (Tue May 16 2000 - 11:37:49 PDT)
Jose Ramon Blas
- Looking for a PREP input file (Thu May 11 2000 - 10:33:28 PDT)
Karl N. Kirschner
- 6-12 nonbonded function (Tue May 09 2000 - 11:17:45 PDT)
kian kani
- AMBER installation (Fri May 19 2000 - 10:27:37 PDT)
Kouji Hauyama
- 4096wat runnning problem (Sat May 27 2000 - 05:41:24 PDT)
- 4096wat running problem (Fri May 26 2000 - 07:09:42 PDT)
- sander compile error with MPICH compiled by PGI compiler (Tue May 23 2000 - 05:34:15 PDT)
- Compile Problem ptraj with PGI compiler (Mon May 22 2000 - 19:45:10 PDT)
Kouji Hayama
- Re: 4096wat running problem (Fri May 26 2000 - 08:36:50 PDT)
Mao Xiang
- amber parameters (Fri May 19 2000 - 21:07:56 PDT)
- gibbs in sodium (Thu May 18 2000 - 19:06:48 PDT)
- Hello (Wed May 17 2000 - 01:13:42 PDT)
Marcela Madrid
- improvements to force field (Tue May 30 2000 - 13:02:35 PDT)
- Simulation of DNA (Fri May 26 2000 - 10:58:19 PDT)
Margaret Cheung
- inquire about the cost of the license. (Wed May 31 2000 - 10:54:13 PDT)
- question on expanding nphb (Tue May 16 2000 - 18:27:31 PDT)
mariang98
- Density value in sander output (Mon May 08 2000 - 14:57:37 PDT)
Michael Crowley
- Re: 4096wat running problem (Fri May 26 2000 - 09:22:10 PDT)
- Re: [pavan.bnpi.com: 'Coordinate resetting in amber6'] (Wed May 17 2000 - 16:08:26 PDT)
Michal Otyepka
- energy decomposition along MD trajectory (Wed May 31 2000 - 05:59:36 PDT)
- (no subject) (Mon May 08 2000 - 02:02:31 PDT)
Pascal Bonnet
- RESP (Wed May 31 2000 - 19:27:34 PDT)
- H+ parameters (Thu May 04 2000 - 18:56:21 PDT)
Peter Gannett
- carnal script (Wed May 10 2000 - 06:37:37 PDT)
Prem Raj Joseph
- Periodic boundary condition (Fri May 26 2000 - 11:36:41 PDT)
- regarding edit option (Tue May 09 2000 - 11:19:30 PDT)
R. M. Fesinmeyer
- Shake and a new computer system (Tue May 30 2000 - 10:50:25 PDT)
rathinavelan thenmalarchelvi
- question about imaging (Sat May 13 2000 - 14:45:30 PDT)
Rebecca Perlow
- Restraint and topology mismatch error (Tue May 23 2000 - 11:58:07 PDT)
Renxiao Wang
- What does this mean? (Tue May 30 2000 - 16:46:03 PDT)
Surjit Dixit
- TAUP (Fri May 12 2000 - 12:18:35 PDT)
Terreux Raphael
- center of mass with gibbs ? (Mon May 29 2000 - 15:46:12 PDT)
- dummy atom as anchor in gibbs ? (Thu May 25 2000 - 14:53:43 PDT)
Vickie Tsui
- Re: AMBER 6 and residual dipolar coupling (Wed May 10 2000 - 10:04:11 PDT)
Victor Pham
- pdb files (Thu May 11 2000 - 17:09:11 PDT)
- pressureS (Fri May 05 2000 - 10:57:24 PDT)
- Baic MD simulation (Tue May 02 2000 - 16:02:44 PDT)
Yong Duan
- Re: problems in sander (Sun May 07 2000 - 13:11:36 PDT)
Yunfeng Hu
- 3-botton emulat (Mon May 22 2000 - 13:10:23 PDT)