Amber Archive Oct 2021 by messages with attachments

262 messages: Starting Fri Oct 01 2021 - 03:30:02 PDT, Ending Sun Oct 31 2021 - 13:30:02 PDT
This period: Most recent messages
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[AMBER] buffer overflow in tleap, AmberTools21, gcc 9.3 Alessandro Contini (Fri Oct 01 2021 - 03:02:44 PDT)
1. 4amber_list.tar.bz2 (109501 bytes)
[AMBER] Atomistic Simulation Center - Invitation to virtual inauguration symposium Dr. Anselm Horn (Mon Oct 04 2021 - 05:00:37 PDT)
1. A3.pdf (683758 bytes)
Re: [AMBER] How to superpose the solvated box to the original pdb structure? Gao Zhenting (Tue Oct 05 2021 - 08:49:50 PDT)
1. tleap.in (165 bytes)
2. fxa.pdb (297267 bytes)
[AMBER] Symmetrical voids during heating stage Nagar, Hemant (Wed Oct 06 2021 - 16:38:09 PDT)
1. min_wholesystem1.PNG (234203 bytes)
2. heat_V_.PNG (180189 bytes)
Re: [AMBER] [SPAM] Help with carbohydrate nomenclature Rafael Nunes (Fri Oct 08 2021 - 09:22:15 PDT)
1. pastedImage.png (18315 bytes)
Re: [AMBER] How many complex trajectories for mmpbsa computations ? Liao (Sun Oct 10 2021 - 16:07:44 PDT)
1. part (156558 bytes)
Re: [AMBER] Amber20/AmberTools21 Installation Test Errors Ravi Abrol (Thu Oct 14 2021 - 01:03:24 PDT)
1. failed_diff.bash.out (6546 bytes)
[AMBER] Unwanted water protein interaction mohamed marzouk (Sat Oct 16 2021 - 08:15:04 PDT)
1. Image.jpeg (138830 bytes)
2. Image.jpeg (90256 bytes)
3. Image.jpeg (243162 bytes)
[AMBER] Fwd: topology file and co-ordinate file making by amber tool (gaff.dat) vivek rabha (Wed Oct 20 2021 - 02:58:09 PDT)
1. cor3.prep (4113 bytes)
Re: [AMBER] cudaMemcpy GpuBuffer::Download failed an illegal memory access was encountered Rangarajan, Amith (Wed Oct 20 2021 - 09:44:56 PDT)
1. modified (421 bytes)
Re: [AMBER] Fwd: Ambertools21 installation problems David A Case (Mon Oct 25 2021 - 06:42:28 PDT)
1. getline.c (27960 bytes)
[AMBER] Atom type does not shown up in PARMCHK.DAT Rohanizeidanlou, Sahar (Tue Oct 26 2021 - 16:38:13 PDT)
1. lig_2.pqr (6213 bytes)
2. lig.prep (6732 bytes)
[AMBER] Wrong Angel Given by Cpptraj? Matthew Guberman-Pfeffer (Fri Oct 29 2021 - 03:38:16 PDT)
1. OnlyHemes.pdb (42529 bytes)
[AMBER] weired Ligand conformation during simulation Sadaf Rani (Fri Oct 29 2021 - 19:10:22 PDT)
1. ligand_conformation_at_frame_1.JPG (27339 bytes)
2. ligand_conformation_at_frame_100.JPG (23494 bytes)
[AMBER] Problem measuring angle in CPPTRAJ Matthew Guberman-Pfeffer (Sat Oct 30 2021 - 13:14:13 PDT)
1. OnlyHemes.pdb (42529 bytes)