Amber Archive May 2019: by messages with attachments

Re: [AMBER] Guidance on WHAM Daniel Fernández Remacha (Tue May 07 2019 - 11:46:45 PDT)
1. image.png (19318 bytes)
2. image.png (159185 bytes)
Re: [AMBER] cuda test failing after installation Ravi Abrol (Tue May 07 2019 - 12:43:28 PDT)
1. myoglobin_md.out.dif (18444 bytes)
Re: [AMBER] Capping a dipeptide with Boc Alessandro Contini (Wed May 08 2019 - 07:33:38 PDT)
1. BOC.off (2971 bytes)
2. BOC.frcmod (573 bytes)
Re: [AMBER] Capping a dipeptide with Boc Alessandro Contini (Wed May 08 2019 - 09:29:09 PDT)
1. OME.frcmod (116 bytes)
2. OME.off (1637 bytes)
[AMBER] Failed to generate parameters Sadaf Rani (Sat May 11 2019 - 08:48:41 PDT)
1. leap.log (58652 bytes)
[AMBER] Center of mass velocity autocorrelation function Reber, David (Sun May 12 2019 - 18:29:33 PDT)
1. Clipboard02.png (47241 bytes)
[AMBER] tleap split lipid when it shouldn't Maximilien BERNE (Mon May 13 2019 - 05:41:42 PDT)
1. imagelink.png (205773 bytes)
2. imageunlink.png (174667 bytes)
Re: [AMBER] tleap split lipid when it shouldn't Maximilien BERNE (Mon May 13 2019 - 07:37:09 PDT)
1. step5_assembly_4_.pdb (43721 bytes)
2. lip_amber.pdb (43456 bytes)
3. lip_amber_reduce.pdb (8914 bytes)
4. lip_amber_reduce_tleap.pdb (18541 bytes)
Re: [AMBER] tleap split lipid when it shouldn't Maximilien BERNE (Mon May 13 2019 - 08:23:28 PDT)
1. lip_amber_tleap.pdb (38509 bytes)
[AMBER] Average structure vs Individual frames Yin, Guowei (Mon May 13 2019 - 18:16:59 PDT)
1. image.png (60372 bytes)
2. image.png (293669 bytes)
Re: [AMBER] tleap split lipid when it shouldn't Maximilien BERNE (Wed May 15 2019 - 03:18:29 PDT)
1. test.pdb (38509 bytes)
Re: [AMBER] tleap split lipid when it shouldn't Maximilien BERNE (Wed May 15 2019 - 07:17:52 PDT)
1. tleap.pdb (18541 bytes)
Re: [AMBER] ELECTRIC_FIELD in md.out file does not match with md.in file Gargi Borgohain (Fri May 17 2019 - 02:45:31 PDT)
1. prod-nvt-ef-new-1.out (23103 bytes)
[AMBER] Temperature variation in QM/MM simulation with AMBER18/G09 Abhilash J (Wed May 22 2019 - 11:38:05 PDT)
1. image.png (35984 bytes)
[AMBER] graph Charu Sharma (JRF) (Mon May 27 2019 - 04:06:01 PDT)
1. 05-27_16-34-29.png (47369 bytes)
Re: [AMBER] compiling Amber Tools 19 Vlad Cojocaru (Tue May 28 2019 - 05:37:07 PDT)
1. configure_python.log (126617 bytes)
Re: [AMBER] reduce info.log Sadaf Rani (Wed May 29 2019 - 03:08:02 PDT)
1. reduce_info.log (34034 bytes)
[AMBER] error with loading HEM parameters for constph redox calcuations Vaibhav Dixit (Wed May 29 2019 - 07:53:28 PDT)
1. 1W0E_amber18.pdb (311438 bytes)
Re: [AMBER] compiling Amber Tools 19 Hashemi, Mohtadin (Thu May 30 2019 - 06:59:59 PDT)
1. Tools19_compile_error.tar.gz (80632 bytes)
Re: [AMBER] Radgyr or distance averages Reber, David (Thu May 30 2019 - 20:03:49 PDT)
1. compile.err (2997 bytes)
Re: [AMBER] error with loading HEM parameters for constph redox calcuations Vaibhav Dixit (Fri May 31 2019 - 12:32:03 PDT)
1. checkbonds.png (256497 bytes)

Amber Archive May 2019 by messages with attachments