Amber Archive Aug 2000 by subject
- "Protonate" errors
- a question about the setting to contrain kinetic energy
- absoft and AMBER6
- AMBER 5.01 on Linux
- AMBER installation
- Amber6 on a ES40/4CPUs
- anal.in format
- analysis tool for water and stacking?
- animation of normal modes
- Annealing with rigid body
- Benchmarking AMD CPUS
- Brief courses on AMBER 6
- Ca2+ parameters
- charges for new compound
- ChemInt2000 hotel rooms
- cobalt
- compiling AMBER5.0 on Beowolf cluster
- Did MM/PBSA runs on linux also?
- dielectric constant
- how to justify the size of a periodic box.
- How to make pdb"q" files easily?
- isoxazole force constants
- MACHINE file for DEC Alpha!
- manganese ions
- MDEN output file format
- minimization from the average structure of MD simulation
- MM-PBSA trajectory file
- Myrinet + Beowulf for AMBER?
- NAD parameters
- need help
- Oct box and ptraj
- Parm99
- Periodic Boundary Condition
- Ph.D. thesis in Strasbourg-France
- PME with charged system
- Problem with PME test
- processing of carnal output
- Profec
- Questions on the definition of parameters
- rdparm/ptraj
- reassigning temp. during MD
- shared mem
- sysdir
- two questions: (1)dihedral, (2) movies
- urgent
- vdw parameter
- Where to download mm5_car1.Z for example1 of mmpbsa?
- Last message date: Thu Aug 31 2000 - 15:23:24 PDT
- Archived on: Mon Dec 23 2024 - 05:53:10 PST
