Amber Archive Aug 2000 by author

68 messages: Starting Tue Aug 01 2000 - 16:44:44 PDT, Ending Thu Aug 31 2000 - 15:23:24 PDT
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Andrew Petersen
- compiling AMBER5.0 on Beowolf cluster (Fri Aug 11 2000 - 13:39:43 PDT)
Bill Ross
- Re: How to make pdb"q" files easily? (Fri Aug 04 2000 - 10:33:58 PDT)
Carlos Simmerling
- Re: reassigning temp. during MD (Wed Aug 23 2000 - 09:41:17 PDT)
- Re: two questions: (1)dihedral, (2) movies (Tue Aug 15 2000 - 08:15:45 PDT)
Chuck Schneider
- Re: sysdir (Wed Aug 23 2000 - 11:01:07 PDT)
darden
- Re: PME with charged system (Fri Aug 18 2000 - 21:52:26 PDT)
David Case
- Re: Brief courses on AMBER 6 (Wed Aug 30 2000 - 09:48:16 PDT)
David Small
- shared mem (Wed Aug 23 2000 - 15:03:40 PDT)
- dielectric constant (Thu Aug 17 2000 - 12:10:25 PDT)
- Re: PME with charged system (Tue Aug 15 2000 - 19:17:45 PDT)
Dayle Smith
- AMBER installation (Wed Aug 16 2000 - 11:55:27 PDT)
Didier Rognan
- Ph.D. thesis in Strasbourg-France (Tue Aug 08 2000 - 02:11:10 PDT)
DOIZI Denis 98775
- cobalt (Thu Aug 17 2000 - 00:31:43 PDT)
Eric Hu
- isoxazole force constants (Mon Aug 07 2000 - 12:30:11 PDT)
Fabrice YERLY
- MDEN output file format (Wed Aug 23 2000 - 03:14:01 PDT)
Frank Yan
- Re: two questions: (1)dihedral, (2) movies (Tue Aug 15 2000 - 08:47:59 PDT)
- analysis tool for water and stacking? (Fri Aug 11 2000 - 15:40:32 PDT)
J. Bryan Buckalew
- anal.in format (Thu Aug 24 2000 - 08:52:21 PDT)
Jarrod Smith
- Re: Brief courses on AMBER 6 (Wed Aug 30 2000 - 10:24:20 PDT)
- absoft and AMBER6 (Thu Aug 24 2000 - 19:33:00 PDT)
- Myrinet + Beowulf for AMBER? (Tue Aug 08 2000 - 07:19:54 PDT)
- Ca2+ parameters (Tue Aug 01 2000 - 16:44:44 PDT)
Jennifer Bui
- MACHINE file for DEC Alpha! (Tue Aug 15 2000 - 00:40:55 PDT)
Jie Guo
- Parm99 (Thu Aug 24 2000 - 09:03:21 PDT)
jim caldwell
- Re: Questions on the definition of parameters (Tue Aug 29 2000 - 12:57:57 PDT)
- Re: sysdir (Wed Aug 23 2000 - 10:30:22 PDT)
- Re: MACHINE file for DEC Alpha! (Tue Aug 15 2000 - 07:30:21 PDT)
- Re: Amber6 on a ES40/4CPUs (Tue Aug 08 2000 - 08:20:49 PDT)
Jithesh P.V
- Re: Problem with PME test (Fri Aug 11 2000 - 09:04:02 PDT)
- Problem with PME test (Thu Aug 10 2000 - 05:01:55 PDT)
Juergen Suehnel
- Re: compiling AMBER5.0 on Beowolf cluster (Sat Aug 12 2000 - 03:52:27 PDT)
Kouji Hayama
- Re: Periodic Boundary Condition (Thu Aug 24 2000 - 00:09:40 PDT)
- RE: Myrinet + Beowulf for AMBER? (Tue Aug 08 2000 - 22:11:41 PDT)
- Re: Ca2+ parameters (Tue Aug 01 2000 - 23:20:06 PDT)
Lawrence Tsang
- Where to download mm5_car1.Z for example1 of mmpbsa? (Mon Aug 07 2000 - 21:59:34 PDT)
- Did MM/PBSA runs on linux also? (Mon Aug 07 2000 - 21:42:39 PDT)
Marcela Madrid
- PME with charged system (Tue Aug 15 2000 - 07:31:04 PDT)
- charges for new compound (Tue Aug 08 2000 - 08:03:54 PDT)
Margaret Cheung
- how to justify the size of a periodic box. (Tue Aug 22 2000 - 16:47:41 PDT)
- a question about the setting to contrain kinetic energy (Sat Aug 05 2000 - 23:04:43 PDT)
Michael Cooney
- "Protonate" errors (Wed Aug 30 2000 - 11:40:53 PDT)
- Brief courses on AMBER 6 (Wed Aug 30 2000 - 08:54:37 PDT)
Michael Crowley
- Re: Problem with PME test (Fri Aug 11 2000 - 12:02:56 PDT)
Michal Otyepka
- processing of carnal output (Tue Aug 22 2000 - 03:23:06 PDT)
Minmin Wang
- minimization from the average structure of MD simulation (Tue Aug 29 2000 - 09:25:01 PDT)
Natasja Brooijmans
- manganese ions (Thu Aug 31 2000 - 15:23:24 PDT)
Nelson Teixeira Brito
- Re: sysdir (Thu Aug 24 2000 - 02:05:02 PDT)
- sysdir (Wed Aug 23 2000 - 08:20:00 PDT)
nurindah wulandari
- need help (Tue Aug 15 2000 - 07:43:48 PDT)
Pornthep Sompornpisut
- Annealing with rigid body (Tue Aug 15 2000 - 12:29:34 PDT)
Raik Gruenberg
- reassigning temp. during MD (Fri Aug 11 2000 - 08:03:06 PDT)
Ramon Garduno
- Re: AMBER 5.01 on Linux (Thu Aug 24 2000 - 13:02:49 PDT)
- AMBER 5.01 on Linux (Fri Aug 18 2000 - 11:53:56 PDT)
Raphael Buencamino
- NAD parameters (Wed Aug 16 2000 - 17:46:37 PDT)
Robert Matthew Fesinmeyer
- Re: reassigning temp. during MD (Mon Aug 21 2000 - 15:20:53 PDT)
- Oct box and ptraj (Mon Aug 21 2000 - 11:12:50 PDT)
samantha hughes
- Re: two questions: (1)dihedral, (2) movies (Tue Aug 15 2000 - 09:12:41 PDT)
- MM-PBSA trajectory file (Fri Aug 11 2000 - 07:28:48 PDT)
Scott Boesch
- animation of normal modes (Thu Aug 03 2000 - 13:26:34 PDT)
Soaring Bear
- Re: dielectric constant (Sat Aug 19 2000 - 08:03:43 PDT)
sohail qamar
- urgent (Tue Aug 08 2000 - 07:21:16 PDT)
Steve Heller
- ChemInt2000 hotel rooms (Sun Aug 06 2000 - 14:59:49 PDT)
Thomas A. Spraggins
- Re: MACHINE file for DEC Alpha! (Tue Aug 15 2000 - 04:59:51 PDT)
Thomas E. Cheatham, III
- Re: rdparm/ptraj (Thu Aug 31 2000 - 11:03:07 PDT)
Todd J. Minehardt
- vdw parameter (Tue Aug 15 2000 - 09:44:50 PDT)
Tuomo Laitinen
- rdparm/ptraj (Thu Aug 31 2000 - 05:50:59 PDT)
wentaofu
- Profec (Fri Aug 04 2000 - 11:17:56 PDT)
Yongxing Liu
- Benchmarking AMD CPUS (Thu Aug 31 2000 - 03:14:36 PDT)