Amber Archive Feb 2016 by messages with attachments

Re: [AMBER] Replacement for xmgrace Jean-Patrick Francoia (Mon Feb 01 2016 - 06:52:42 PST)
1. mdout.py (16790 bytes)
Re: [AMBER] Replacement for xmgrace Jean-Patrick Francoia (Mon Feb 01 2016 - 11:27:13 PST)
1. summary.EKTOT (30033 bytes)
[AMBER] Amber/tutorial/advanced/tutorial16/ zoran matovic (Tue Feb 02 2016 - 06:10:42 PST)
1. input_cards.jpg (68392 bytes)
2. min_images.jpg (64927 bytes)
3. heat_images.jpg (70313 bytes)
Re: [AMBER] Question about mask command Daniel Roe (Wed Feb 03 2016 - 08:17:53 PST)
1. mask.pdb.1.jpg (99514 bytes)
[AMBER] Regarding MMGBSA calculation neha chaudhary (Thu Feb 04 2016 - 23:48:24 PST)
1. mmpbsa.in (152 bytes)
[AMBER] Zero pressure with pmemd.cuda Batuhan Kav (Fri Feb 05 2016 - 08:10:57 PST)
1. 01_Min.in (114 bytes)
2. 02_Heat.in (383 bytes)
3. 03_Prod_ini.in (698 bytes)
4. 03_Prod.in (761 bytes)
[AMBER] problem with energy minimization (sander) Maryam Hamzehee (Wed Feb 10 2016 - 04:26:06 PST)
1. j44_mh.pdb (127478 bytes)
2. min.out (7986 bytes)
[AMBER] Normalizing histogram with CPPTRAJ anu chandra (Wed Feb 10 2016 - 09:05:25 PST)
1. figure.png (5061 bytes)
[AMBER] Amber 14 w/ CUDA - unclear "make test"-errors Falko Jähnert (Thu Feb 11 2016 - 04:36:50 PST)
1. 02-09_09-33-40_short.diff (64751 bytes)
2. 02-09_09-33-40_short.log (1881 bytes)
[AMBER] Dear all ankita mehta (Fri Feb 12 2016 - 03:03:33 PST)
1. leap.log (72406 bytes)
2. solvation-12-6-4.out (17488 bytes)
[AMBER] Regarding minimization in AMBER neha chaudhary (Fri Feb 12 2016 - 22:26:18 PST)
1. min.out (6630 bytes)
Re: [AMBER] Dear all ankita mehta (Tue Feb 16 2016 - 02:43:57 PST)
1. 7col.dist (270 bytes)
2. Screenshot.png (73054 bytes)
[AMBER] antechamber run for FAD 홍종희 (Fri Feb 19 2016 - 02:12:20 PST)
1. FAD_h.pdb (8982 bytes)
[AMBER] No exe file in Amberhome Mahdieh Hadi (Mon Feb 22 2016 - 10:53:15 PST)
1. 02-22_at_19.40.54.png (161823 bytes)
Re: [AMBER] 回复：Re: Nucleic acid builder yhzahsc (Tue Feb 23 2016 - 19:39:59 PST)
1. nuc.c (573 bytes)
Re: [AMBER] 回复：Re: Nucleic acid builder yhzahsc (Tue Feb 23 2016 - 19:41:27 PST)
1. nuc.nab (92 bytes)
[AMBER] Fwd: Thermodynamic Integration Vertika Gautam (Wed Feb 24 2016 - 22:49:25 PST)
1. sequence_alignment.docx (38170 bytes)
[AMBER] Ph.D. position, Nancy, France Gerald Monard (Thu Feb 25 2016 - 00:39:31 PST)
1. sebomd.pdf (36114 bytes)
Re: [AMBER] AMBER Digest, Vol 1497, Issue 1 necmettin pirinccioglu (Fri Feb 26 2016 - 05:21:53 PST)
1. mdcrd.tar.gz (344707 bytes)
Re: [AMBER] SP3 Nitrogen planarity issue with ff14SB Prayagraj Fandilolu (Sat Feb 27 2016 - 05:00:30 PST)
1. PMF.prepin (5652 bytes)
Re: [AMBER] SP3 Nitrogen planarity issue with ff14SB Prayagraj Fandilolu (Sat Feb 27 2016 - 23:53:20 PST)
1. ff14SB.pdb (10661 bytes)
2. ff99bsc0.pdb (14023 bytes)
Re: [AMBER] problem running MD for diphosphoric acid anion necmettin pirinccioglu (Sun Feb 28 2016 - 23:56:44 PST)
1. mdcrd.tar.gz (344707 bytes)

Last message date: Mon Feb 29 2016 - 23:30:07 PST
Archived on: Sun Nov 24 2024 - 05:55:31 PST

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