Re: [AMBER] installation on MacOS10.6

From: erik zuiderweg <zuiderwe.umich.edu>
Date: Fri, 14 May 2010 08:43:54 -0400

gfortran, the one coming with the gnu package
On May 13, 2010, at 6:04 PM, Alan wrote:

> So the question here is which gfortran are you using? Fink? MacPorts?
> Anything else?
>
>> From your economical description of the problem I would assume
>> you're using
> gfortran from Fink and you are not aware of /sw/bin/gcc-4 (Fink
> gcc) and
> /usr/bin/gcc (Apple gcc) to gcc-4, since it seems you're mixing /usr/
> bin/gcc
> with gfortran.
>
> See
>
> http://archive.ambermd.org/201004/0600.html
> http://archive.ambermd.org/201004/0607.html
>
> Alan
>
> On Thu, May 13, 2010 at 22:20, erik zuiderweg <zuiderwe.umich.edu>
> wrote:
>
>> yes
>>
>>
>>
>> On May 13, 2010, at 5:12 PM, David Watson wrote:
>>
>> Are you using
>>> configure -macAccelerate gnu
>>> to configure AT1.4?
>>>
>>> On May 13, 2010, at 3:52 PM, erik zuiderweg wrote:
>>>
>>> I am trying to install Ambertools1.4 on a Intel MacbookPro ,
>>> running Os
>>>> 10.6.
>>>> using the bash shell
>>>>
>>>> I have the gnu compilers installed.
>>>>
>>>> The configuration file is failing, WARNING: Unable to compile mixed
>>>> C/Fortran code. (see attached log)
>>>>
>>>> The installation is failing because of a missing
>>>> /usr/local/amber11/lib/arpack.a file
>>>>
>>>> (see attached
>>>> log)
>>>> <Ambertools_configure_problems.txt><Ambertools_make_problems.txt>
>>>>
>>>> Please help!_______________________________________________
>>>> AMBER mailing list
>>>> AMBER.ambermd.org
>>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>>
>>>
>>>
>>> _______________________________________________
>>> AMBER mailing list
>>> AMBER.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>
>>>
>>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>
>
>
> --
> Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate
> Department of Biochemistry, University of Cambridge.
> 80 Tennis Court Road, Cambridge CB2 1GA, UK.
>>> http://www.bio.cam.ac.uk/~awd28<<
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
>


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri May 14 2010 - 06:00:11 PDT
Custom Search