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-- Dr. Dean Cuebas, Associate Prof of Chemistry deancuebas.missouristate.edu, Ph 417-836-8567 FAX 417-836-5507 Dept. of Chemistry, Missouri State University Springfield, Missouri 65897 > From: Alan <alanwilter.gmail.com> > Reply-To: AMBER Mailing List <amber.ambermd.org> > Date: Tue, 27 Apr 2010 12:43:06 -0500 > To: AMBER Mailing List <amber.ambermd.org> > Subject: Re: [AMBER] Compiling AmberTools 1.4 on MacOS10.5 > > Hi Dean, > > This problem is familiar to me, but first I need to know which gfortran are > you using. > > If you are using gfortran from fink, as I do, open 'configure' file with an > text editor and where you see gcc or g++, replace with gcc-4 and g++-4, then > proceed with ./configure -macAccelerate gnu etc. > > Alan > > On Tue, Apr 27, 2010 at 18:26, Dean Cuebas > <deancuebas.missouristate.edu>wrote: > >> I get the following error message during preparation of ./configure gnu and >> not sure how to handle the lgfortran error: >> >> Thanks in advance! >> Dean >> >> +++++++++++++++++++++++++++++++++++++ >> Your AMBERHOME environment variable should be set to /usr/local/amber11 >> >> >> Obtaining the gnu suite version: >> gcc -v >> The version is 4.0.1 >> >> Testing the gcc compiler: >> gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o testp testp.c >> OK >> >> Validating the C++ compiler version: >> g++ -v >> The version is 4.0.1 >> OK >> >> Testing the gfortran compiler: >> gfortran -O0 -o testp testp.f >> OK >> >> Testing mixed C/Fortran compilation: >> gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -c -o testp.c.o testp.c >> gfortran -O0 -c -o testp.f.o testp.f >> gcc -o testp testp.c.o testp.f.o -lgfortran >> ld: library not found for -lgfortran >> collect2: ld returned 1 exit status >> ./configure: line 1057: ./testp: No such file or directory >> WARNING: Unable to compile mixed C/Fortran code. >> >> Testing pointer size: >> gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -o test_pointer_size >> test_pointer_size.c >> Detected 32 bit operating system. >> >> Testing flex: >> OK >> >> Configuring NetCDF; (may be time-consuming) >> >> NetCDF configure succeeded. >> >> Configuring fftw-2.1.5; (may be time-consuming) >> >> fftw-2.1.5 configure succeeded. >> >> The configuration file, config.h, was successfully created. >> >> The next step is to type 'make install' >> >> +++++++++++++++++++++++++++++++++++ >> >> >> >> _______________________________________________ >> AMBER mailing list >> AMBER.ambermd.org >> http://lists.ambermd.org/mailman/listinfo/amber >> > > > > -- > Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate > Department of Biochemistry, University of Cambridge. > 80 Tennis Court Road, Cambridge CB2 1GA, UK. >>> http://www.bio.cam.ac.uk/~awd28<< > _______________________________________________ > AMBER mailing list > AMBER.ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber _______________________________________________ AMBER mailing list AMBER.ambermd.org http://lists.ambermd.org/mailman/listinfo/amberReceived on Tue Apr 27 2010 - 13:00:03 PDT