Amber Archive May 2001: By Thread

AMBER parameters Andreas Svrcek-Seiler (Tue May 01 2001 - 06:58:13 PDT)
Wallclock on Intel/Linux sander Jarrod Smith (Tue May 01 2001 - 12:48:36 PDT)
ANAL (Amber6.0) Aldo Jongejan (Wed May 02 2001 - 06:01:31 PDT)
Important Address change jim caldwell (Wed May 02 2001 - 11:42:04 PDT)
- question about mm-pbsa Zhangxd (Wed May 02 2001 - 13:02:50 PDT)
- Why does water leak!? Sanjeev B.S. (Thu May 03 2001 - 02:07:51 PDT)
- sander6/Linux compiled with pgf77 + mpipro Jarrod Smith (Thu May 03 2001 - 08:11:16 PDT)
  - Re: sander6/Linux compiled with pgf77 + mpipro Jarrod Smith (Thu May 03 2001 - 12:41:06 PDT)
Re: addions in leap Bill Ross (Fri May 04 2001 - 07:23:44 PDT)
Ewalb bomb on SP3 Sanjeev B.S. (Sat May 05 2001 - 12:38:23 PDT)
- question about mm-pbsa Zhangxd (Mon May 07 2001 - 05:32:26 PDT)
- peek_ewald_inpcrd Andrew Aird (Mon May 07 2001 - 09:48:59 PDT)
  - Re: peek_ewald_inpcrd darden (Mon May 07 2001 - 14:01:08 PDT)
  - sander_classic: bond energy problem Miyashita, Osamu (Mon May 07 2001 - 14:28:03 PDT)
  - parameters forms Yuguang Mu (Tue May 08 2001 - 01:13:32 PDT)
- parameters Adrian E. Roitberg (Mon May 07 2001 - 11:00:55 PDT)
Re: topology description Andreas Svrcek-Seiler (Tue May 08 2001 - 08:18:12 PDT)
- Re: topology description Bill Ross (Wed May 09 2001 - 15:27:01 PDT)
escaping atoms.... Amesh Patel (Wed May 09 2001 - 07:36:30 PDT)
- DNA strand flying Stephane (Thu May 10 2001 - 08:48:17 PDT)
- Minimization inputs in AMBER6!! A.Madhumalar (Thu May 10 2001 - 10:09:27 PDT)
- sorry for the virus. Guo, Jianxin (Thu May 10 2001 - 11:52:55 PDT)
- ptraj Vector command Troy Bothwell (Thu May 10 2001 - 15:36:04 PDT)
- tree names in group spec. Artem Mamonov (Thu May 10 2001 - 16:49:02 PDT)
Resp liz (Wed May 09 2001 - 12:14:32 PDT)
Re: escaping atoms.... Bill Ross (Wed May 09 2001 - 15:34:27 PDT)
Diffusion constant Yanni Wang (Thu May 10 2001 - 02:14:34 PDT)
Re: tree names in group spec. Bill Ross (Thu May 10 2001 - 18:37:01 PDT)
carnal error with crd files stripped of waters Michael Cooney (Fri May 11 2001 - 13:52:47 PDT)
- Re: carnal error with crd files stripped of waters samantha hughes (Mon May 14 2001 - 01:20:17 PDT)
Re: Residue wise RMSD using carnal Bill Ross (Sun May 13 2001 - 10:28:05 PDT)
Amber 6.0 on LINUX with absoft Soonmin Jang (Mon May 14 2001 - 00:43:16 PDT)
- Re: Amber 6.0 on LINUX with absoft Jarrod Smith (Mon May 14 2001 - 07:22:42 PDT)
  - the program and references Zhangxd (Tue May 15 2001 - 08:33:01 PDT)
  - phosphotyrosine Fabrizio Giordanetto (Tue May 15 2001 - 08:34:51 PDT)
  - AMBER enquiry Marjoribanks, Andrew G (Tue May 15 2001 - 10:21:03 PDT)
  - RMSD calculation arubin_at_unmc.edu (Tue May 15 2001 - 12:43:46 PDT)
Re: RMSD calculation Bill Ross (Tue May 15 2001 - 14:49:39 PDT)
- Re: RMSD calculation Carlos Simmerling (Tue May 15 2001 - 16:13:47 PDT)
- ewald bomb Martin Crnugelj (Wed May 16 2001 - 00:43:13 PDT)
- average structure Krishna Bisetty (Wed May 16 2001 - 03:33:41 PDT)
- (no subject) Rino Ragno (Wed May 16 2001 - 04:47:15 PDT)
- PSC BIOMEDICAL WORKSHOPS 2001 Troy Wymore (Wed May 16 2001 - 10:27:50 PDT)
Re: CCL:Date: Wed, 16 May 2001 13:47:15 +0200 Bill Ross (Wed May 16 2001 - 12:59:11 PDT)
box of water Marcela Madrid (Wed May 16 2001 - 15:04:01 PDT)
Re: Residence time Nada Spackova (Thu May 17 2001 - 06:24:07 PDT)
Query Monica (Sat May 19 2001 - 05:09:24 PDT)
GDP/GTP Nathalie Duclert (Mon May 21 2001 - 06:02:12 PDT)
matrix diagonalizing subroutines Haitao Dong (Mon May 21 2001 - 11:15:16 PDT)
matrix diagonalizing subroutines Haitao Dong (Mon May 21 2001 - 11:45:03 PDT)
f2c.h Osmar Norberto de Souza (Mon May 21 2001 - 13:20:38 PDT)
Re: Ewald error estimation darden (Mon May 21 2001 - 13:58:17 PDT)
Re: f2c.h Bill Ross (Mon May 21 2001 - 15:10:56 PDT)
CUT in AMBER6 arubin_at_unmc.edu (Mon May 21 2001 - 15:53:41 PDT)
AMBER compilation woes Elizabeth K. White (Mon May 21 2001 - 22:12:04 PDT)
Re: AMBER compilation woes Bill Ross (Tue May 22 2001 - 00:01:52 PDT)
Re: problem in xleap Bill Ross (Wed May 30 2001 - 09:50:17 PDT)
Re: add counterions Bill Ross (Wed May 30 2001 - 09:58:53 PDT)
Peter Kollman memorial jim caldwell (Wed May 30 2001 - 16:25:17 PDT)
(no subject) Sarah Tschampel (Thu May 31 2001 - 09:01:09 PDT)
make test.all crashes in AMBER Elizabeth K. White (Thu May 31 2001 - 14:48:12 PDT)
- Re: make test.all crashes in AMBER jim caldwell (Thu May 31 2001 - 15:29:52 PDT)
- machine/OS on which make test.all crashes in AMBER Elizabeth K. White (Thu May 31 2001 - 17:51:22 PDT)
- sander 6 warming up Shixiang Yan (Thu May 31 2001 - 19:06:20 PDT)

Amber Archive May 2001 By Thread