Re: [AMBER] How to minimize a pdb format file in Amber 16

From: Hector A. Baldoni <hbaldoni.unsl.edu.ar>
Date: Thu, 28 Oct 2021 09:36:13 -0300

Hi,

This may help you: http://archive.ambermd.org/201506/0097.html

Greeting,
Hector


El 2021-10-28 01:52, priya murugan escribió:
> Hello researchers,
>
> Can some suggest to me how to minimize the PDB format file in Amber 16?
> Before this, I've used Amber 16 to minimize my .CRD format file. But
> when I
> tried to minimize my representative structure in PDB format which I got
> from clustering analysis, but unable to run minimization.
>
> Kindly let me your thoughts and if there is any other option other than
> AMBER kindly let me know.
>
> Thanks & Regards
>
> *PRIYA MURUGAN *
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> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber 

-- 
--------------------------------------
  Dr. Hector A. Baldoni
  Profesor Titular (FQByF-UNSL)
  Investigador Adjunto (IMASL-CONICET)
  Area de Quimica General e Inorganica
  Universidad Nacional de San Luis
  Chacabuco 917 (D5700BWS)
  San Luis - Argentina
  hbaldoni at unsl dot edu dot ar
  Tel.:+54-(0)266-4520300 ext. 6157
--------------------------------------
First things first. But not necessarily in such order.
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Received on Thu Oct 28 2021 - 06:00:03 PDT
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