Amber Archive Mar 2002 by author

93 messages: Starting Fri Mar 01 2002 - 00:25:27 PST, Ending Sun Mar 31 2002 - 23:30:24 PST
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A. Ababou
- MS program ... (Sat Mar 23 2002 - 08:21:15 PST)
A.Madhumalar
- Hydrogen bond energy using Anal (Tue Mar 26 2002 - 02:23:34 PST)
amber mail account
- Release of Amber, version 7 (fwd) (Sun Mar 03 2002 - 15:13:26 PST)
Andreas Svrcek-Seiler
- Re: minimization problem (Tue Mar 19 2002 - 05:33:19 PST)
Andy Purkiss
- Re: carnal RST output format (Tue Mar 19 2002 - 12:45:00 PST)
Bill Ross
- Re: compiling error. (Sun Mar 31 2002 - 23:30:24 PST)
- Re: Problem with atom type (Thu Mar 28 2002 - 16:14:16 PST)
- Re: change topology (Thu Mar 28 2002 - 01:45:49 PST)
- Re: creating a unit wth xleap (Tue Mar 19 2002 - 11:43:25 PST)
- Re: carnal RST output format (Tue Mar 19 2002 - 11:32:36 PST)
- Re: leap calculation (loadamberprep) (Wed Mar 06 2002 - 11:22:33 PST)
- Re: a question about .in files (Wed Mar 06 2002 - 11:16:53 PST)
Campbell, Matthew P
- (no subject) (Tue Mar 05 2002 - 09:21:07 PST)
Carles Ferrer
- limit of written files with ptraj (Mon Mar 11 2002 - 12:54:16 PST)
Carlos Simmerling
- Re: compiling error. (Sun Mar 31 2002 - 07:24:19 PST)
Cezary Czaplewski
- amber 60 on Unicos Cray (Mon Mar 04 2002 - 09:56:36 PST)
Computational Chemistry Job Market
- Resending: Medicinal and Computational Chemistry Job Market (Mon Mar 25 2002 - 12:05:03 PST)
CUI, Guanglei
- Re: combining trajectory file (Tue Mar 12 2002 - 08:24:44 PST)
- Re: GB simulation (Mon Mar 04 2002 - 07:41:53 PST)
David Case
- Re: a little bit confused with leap-frog algorithm... (Thu Mar 28 2002 - 17:52:38 PST)
- Re: Amber6, GB (Memory, MATOM, nmr.h)/Folding (mutation) (Thu Mar 28 2002 - 10:40:16 PST)
- Re: What is the atoms limit for Amber 7? (Wed Mar 27 2002 - 15:45:44 PST)
- Re: GB model and belly (Tue Mar 26 2002 - 15:07:33 PST)
- Re: MM-PBSA philosophy (Wed Mar 20 2002 - 08:10:05 PST)
- Re: scaleCharges (Mon Mar 11 2002 - 09:37:51 PST)
deepak rangaswamy
- (no subject) (Fri Mar 01 2002 - 03:00:51 PST)
Demchuk, Eugene
- RE: Dual AMD motherboards (Mon Mar 18 2002 - 16:52:55 PST)
dkon_at_email.arizona.edu
- More GB/Belly (Tue Mar 26 2002 - 14:00:23 PST)
- GB model and belly (Tue Mar 26 2002 - 13:46:40 PST)
Fabrice Yerly
- Re Europium force field parms (Sun Mar 10 2002 - 23:32:59 PST)
Felipe Pineda
- Re: MM-PBSA philosophy (Wed Mar 20 2002 - 06:25:05 PST)
- Re: AMBER 99 (Fri Mar 01 2002 - 00:25:27 PST)
FyD
- dG of wild type/mutant (Thu Mar 07 2002 - 03:26:31 PST)
Giulio Rastelli
- GB simulation (Mon Mar 04 2002 - 08:32:28 PST)
IAF
- Amber6, GB (Memory, MATOM, nmr.h)/Folding (mutation) (Thu Mar 28 2002 - 09:56:04 PST)
Ian R Bates
- secondary structure (Tue Mar 26 2002 - 11:49:48 PST)
- mdcrd to arc (Sat Mar 23 2002 - 08:46:21 PST)
Itziar Maestre Asenjo
- building bcyd with tleap (Wed Mar 20 2002 - 02:51:47 PST)
- leap calculation (Wed Mar 06 2002 - 09:43:44 PST)
Jake Isaacs
- statistical analysis of MD trajectories (Thu Mar 07 2002 - 09:24:03 PST)
jeff dyason
- sulfate and sulfamate parameters (Wed Mar 27 2002 - 20:28:55 PST)
Jerry wu
- concentrated system (Mon Mar 04 2002 - 00:36:21 PST)
jim caldwell
- Dual AMD ASUS A7M266-D Solved (Mon Mar 18 2002 - 18:37:19 PST)
- RE: Dual AMD motherboards (Mon Mar 18 2002 - 18:04:24 PST)
- Dual AMD motherboards (Mon Mar 18 2002 - 15:47:12 PST)
John Finke
- problems using Link (Tue Mar 26 2002 - 12:39:59 PST)
Lepsa
- Re: polarizabilities (Tue Mar 26 2002 - 01:12:09 PST)
- Fw: parameter estimation (Fri Mar 08 2002 - 01:52:50 PST)
Marc Baaden
- Re Europium force field parms (Mon Mar 11 2002 - 03:52:40 PST)
Marcela Madrid
- creating a unit wth xleap (Tue Mar 19 2002 - 11:07:30 PST)
Margaret Cheung
- Re: compiling error. (Sun Mar 31 2002 - 20:44:07 PST)
- compiling error. (Sat Mar 30 2002 - 23:26:53 PST)
- Re: a little bit confused with leap-frog algorithm... (Sat Mar 30 2002 - 19:35:36 PST)
- a little bit confused with leap-frog algorithm... (Thu Mar 28 2002 - 13:08:40 PST)
Michal Otyepka
- change topology (Thu Mar 28 2002 - 00:44:38 PST)
- Polarizabilities, charge scaling and ions (Wed Mar 27 2002 - 01:42:29 PST)
- MM-PBSA philosophy (Wed Mar 20 2002 - 04:34:24 PST)
Mike Keller
- Magnesium as a DNA counterion in AMBER 6.0 (Thu Mar 28 2002 - 07:31:29 PST)
Monica
- AMBER 5 (Wed Mar 27 2002 - 20:29:12 PST)
Natasja Brooijmans
- Re: combining trajectory file (Tue Mar 12 2002 - 08:00:38 PST)
nepenthes_at_vplaces.net
- choosing a forcefield (Thu Mar 07 2002 - 19:51:25 PST)
Pascal Bonnet
- carnal RST output format (Tue Mar 19 2002 - 06:12:31 PST)
- carnal and union: solution (Mon Mar 04 2002 - 04:33:17 PST)
- carnal and union (Mon Mar 04 2002 - 01:00:20 PST)
Peter Fojan
- Question about obtaining amber! (Thu Mar 21 2002 - 05:19:59 PST)
Peter Gannett
- Europium force field parms (Sun Mar 10 2002 - 12:07:44 PST)
ramon kleber da rocha
- Are the programs sander and gibbs in Amber 7 parallel? (Wed Mar 06 2002 - 11:28:01 PST)
rhertadi_at_bio.titech.ac.jp
- Problem with atom type (Thu Mar 28 2002 - 13:55:33 PST)
Richard Kho
- help please :) (Fri Mar 15 2002 - 16:59:23 PST)
Rukman Hertadi
- nmropt problem in AMBER7 (Mon Mar 25 2002 - 01:51:22 PST)
- combining trajectory file (Tue Mar 12 2002 - 01:48:49 PST)
- rdparm error message (Sun Mar 10 2002 - 00:46:53 PST)
Samantha
- Re: MS program ... (Sat Mar 23 2002 - 09:09:14 PST)
Sanjeev B.S.
- Amber6 & ES40 incompatability (Tue Mar 19 2002 - 23:01:17 PST)
shailendra singh
- Re: Amber (Mon Mar 18 2002 - 21:57:48 PST)
Shixiang Yan
- s-matrix format and ftnmr (Wed Mar 27 2002 - 13:49:50 PST)
SPEROLEEM_at_aol.com
- Re: Release of Amber, version 7 (fwd) (Tue Mar 05 2002 - 14:16:27 PST)
St�phane Teletch�a
- Still no bench (Tue Mar 19 2002 - 07:17:45 PST)
Sue Heavner
- convergence of MD simulations (Sat Mar 30 2002 - 15:02:16 PST)
thenmalar rathinavelan
- high electrostatic energy (Thu Mar 07 2002 - 21:13:40 PST)
Thomas Cheatham
- Re: combining trajectory file (Tue Mar 12 2002 - 10:30:51 PST)
Uwe Richter
- atom connection, .off file problem (Wed Mar 20 2002 - 05:48:07 PST)
- minimization problem (Tue Mar 19 2002 - 04:22:06 PST)
Vlad Cojocaru
- new units (Fri Mar 08 2002 - 06:35:46 PST)
- parameter estimation (Thu Mar 07 2002 - 10:32:25 PST)
- converting some files (Thu Mar 07 2002 - 03:00:00 PST)
- a question about .in files (Wed Mar 06 2002 - 07:00:02 PST)
Vojta Klusak
- scaleCharges (Mon Mar 11 2002 - 01:45:54 PST)
William Wei
- What is the atoms limit for Amber 7? (Wed Mar 27 2002 - 14:19:34 PST)
Wolfe, Jennifer
- Post-doctoral position (Mon Mar 18 2002 - 08:33:11 PST)
X. Tan
- question on Gibbs calculation (Tue Mar 12 2002 - 13:50:24 PST)
- Re: questions about resp (Tue Mar 12 2002 - 13:02:22 PST)
Zhe SUN
- One question about how to use the amber (Tue Mar 26 2002 - 04:49:35 PST)