Amber Archive Nov 2023 by messages with attachments

133 messages: Starting Tue Oct 31 2023 - 19:00:02 PDT, Ending Thu Nov 30 2023 - 20:30:02 PST
This period: Most recent messages
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[AMBER] Continuous constant pH MD Skanda Sastry via AMBER (Thu Nov 02 2023 - 00:31:27 PDT)
1. pH_convergence.png (65168 bytes)
[AMBER] RESP charge fitting error in MCPB.py Kandhan, Palanisamy via AMBER (Thu Nov 02 2023 - 10:54:46 PDT)
1. resp1.chg (2430 bytes)
2. resp2.chg (2430 bytes)
[AMBER] Modifying a bias .nc file for ABMD Michael Bruist via AMBER (Fri Nov 03 2023 - 18:45:17 PDT)
1. smime.p7s (1635 bytes)
Re: [AMBER] Rdf calculation: SATYAJIT KHATUA via AMBER (Sun Nov 05 2023 - 23:59:13 PST)
1. image.gif (42 bytes)
2. image.gif (42 bytes)
3. image.gif (42 bytes)
4. image.gif (42 bytes)
5. image.gif (42 bytes)
Re: [AMBER] Rdf calculation: SATYAJIT KHATUA via AMBER (Mon Nov 06 2023 - 00:33:06 PST)
1. image.gif (42 bytes)
[AMBER] Compilation Failures? Jones De Andrade via AMBER (Wed Nov 08 2023 - 18:47:00 PST)
1. 11-08_02-33-56.diff__size_2129 (2129 bytes)
2. 11-08_16-05-06.diff__size_11514 (11514 bytes)
3. 11-08_16-36-08.diff__size_136426 (136426 bytes)
[AMBER] CUDA version for AMBER22 Mingxuan Jiang via AMBER (Fri Nov 10 2023 - 01:52:55 PST)
1. image001.png (20322 bytes)
2. image002.png (16839 bytes)
[AMBER] Enquiry about the Best way to Simulate Phosphorylated Tyrosines Mingxuan Jiang via AMBER (Fri Nov 10 2023 - 11:31:46 PST)
1. image001.png (20322 bytes)
2. image002.png (16839 bytes)
[AMBER] cyclic peptide in water box Sepideh Jafari via AMBER (Mon Nov 13 2023 - 00:29:35 PST)
1. deformed.png (10216 bytes)
Re: [AMBER] PBSA error Ray Luo via AMBER (Wed Nov 15 2023 - 18:35:47 PST)
1. 11-15_at_8.59.22_PM.png (105126 bytes)
2. 11-15_at_8.59.56_PM.png (74606 bytes)
[AMBER] antechamber error-- QMMM: System specified with odd number of electrons Yang, Li-Yen via AMBER (Wed Nov 29 2023 - 15:24:34 PST)
1. ligand_h.pdb (10976 bytes)