Amber Archive Nov 2022 by messages with attachments
203 messages
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Starting
Mon Oct 31 2022 - 23:00:02 PDT,
Ending
Wed Nov 30 2022 - 15:00:02 PST
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Re: [AMBER] about mmgbsa method
laura zhang via AMBER
(Wed Nov 02 2022 - 13:39:10 PDT)
image.png
(194316 bytes)
[AMBER] Installation of amber18 on on parallel CPU
Dulal Mondal via AMBER
(Thu Nov 03 2022 - 22:04:28 PDT)
11-04_01-35-38.log
(52079 bytes)
11-04_01-35-38.diff
(812 bytes)
11-04_01-19-17.log
(219791 bytes)
[AMBER] Metal center created with MCPB.py collapses on MD start?
Gustavo Seabra via AMBER
(Fri Nov 04 2022 - 19:06:39 PDT)
MCPB.in
(410 bytes)
[AMBER] Autoimage cannot find topology information
Hunter Wilson via AMBER
(Tue Nov 08 2022 - 10:39:10 PST)
7JSD_tleap.in
(1017 bytes)
ptraj.in
(1903 bytes)
7JSD_mcpbpy.pdb
(278698 bytes)
Re: [AMBER] Installation Problem
Matthew Guberman-Pfeffer via AMBER
(Thu Nov 10 2022 - 06:06:36 PST)
11-10_02-12-30.diff
(7036 bytes)
[AMBER] Installation of amber18 on on parallel CPU
Dulal Mondal via AMBER
(Fri Nov 11 2022 - 10:49:21 PST)
11-11_23-16-21.log
(36036 bytes)
11-11_22-37-12.log
(221628 bytes)
[AMBER] Installation of amber18 (MPI version) with CPU and intel mpi
Dulal Mondal via AMBER
(Fri Nov 11 2022 - 23:59:33 PST)
11-12_01-00-19.log
(65070 bytes)
11-12_00-21-45.log
(216784 bytes)
Re: [AMBER] Installation of amber18 (MPI version) with CPU and intel mpi
Dulal Mondal via AMBER
(Mon Nov 14 2022 - 23:47:34 PST)
11-15_12-37-13.log
(51832 bytes)
11-15_12-37-13.diff
(1267 bytes)
11-15_11-53-03.log
(219971 bytes)
Re: [AMBER] Unable to access xleap software!
Swapnil Singh via AMBER
(Tue Nov 15 2022 - 13:06:23 PST)
image.png
(251733 bytes)
[AMBER] Gradual heating: Linear response pressure?
Hocine EL KHAOUDI ENYOURY via AMBER
(Thu Nov 17 2022 - 01:49:12 PST)
Attachment.tiff
(292798 bytes)
[AMBER] Temperature drop while switching from NVT to NPT during equilibration
Reim, Thorben via AMBER
(Thu Nov 17 2022 - 03:46:21 PST)
heat_nvt.mdin
(1227 bytes)
volume_npt.min
(974 bytes)
[AMBER] Messages not getting through to the Amber Mailing List?
Gert Kruger via AMBER
(Tue Nov 22 2022 - 08:25:48 PST)
DFE85E5DBA6C41738CE761B8F9C857F5.png
(144 bytes)
[AMBER] Antechamber and py_resp qout format
Евгений Кадцын via AMBER
(Thu Nov 24 2022 - 10:05:17 PST)
ace_leuol.quout2
(2998 bytes)
ace_leuol.mol2
(2886 bytes)
[AMBER] Questions about reading the right LJ_Acoef values in *.prmtop file
ChenXin via AMBER
(Fri Nov 25 2022 - 23:04:15 PST)
a.prmtop
(42825 bytes)
[AMBER] Inconsistent GPU Results
Matthew Guberman-Pfeffer via AMBER
(Sun Nov 27 2022 - 06:44:50 PST)
TImin_0.04_worked.out
(46764 bytes)
TImin_0.04_failed.out
(46764 bytes)
Re: [AMBER] {SPAM?} Inconsistent GPU Results
Matthew Guberman-Pfeffer via AMBER
(Sun Nov 27 2022 - 07:58:35 PST)
1.tiff
(202540 bytes)
[AMBER] test FAILURE in ired.vec.diff
Martin Juhás via AMBER
(Tue Nov 29 2022 - 08:05:49 PST)
smime.p7s
(6765 bytes)
Last message date
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Wed Nov 30 2022 - 15:00:02 PST
Archived on
: Wed Dec 04 2024 - 05:56:11 PST
203 messages
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