Are you sure they’re corrupted and not just netcdf trajectories? Sometimes with the mdcrd text files I’ve had corruption but not on only 10 ns. Also sometimes the transfer process affects this. Make sure you’re using netcdf files. They are less prone to corruption.
> On Feb 20, 2021, at 11:36 AM, Victoria E Hill <vehill1.sheffield.ac.uk> wrote:
>
> Hi,
>
> I have been running some 10 ns simulations and almost all are corrupted. I
> know how to fix this with 'skipbadframes' but I was wondering why this
> happens? As I wasn't able to find an explanation online.
>
> Thanks,
> Victoria
>
> --
> *Victoria Hill*
>
> PhD student, Craggs lab
> Department of Chemistry
> University of Sheffield
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Received on Sat Feb 20 2021 - 09:30:02 PST
