[AMBER] nastruct command query

From: Athena N <athena.nas01.gmail.com>
Date: Fri, 26 Jun 2020 00:55:31 +0530

Respected group members,

I have run a 500ns simulation run on a DNA duplex and want to analyze some
parameters like groove width. I have no idea how to use the nastruct
command. Since I am a beginner, I don't have much idea about how to use the
output nc trajectory file to do these. I have read that we can use AMBER
for all these analysis like 3DNA does. Could anyone give me some idea of
using the nastruct command?

Thank you. Regards
AMBER mailing list
Received on Thu Jun 25 2020 - 12:30:02 PDT
Custom Search