Amber Archive Dec 2019 by messages with attachments

228 messages: Starting Sun Dec 01 2019 - 21:00:01 PST, Ending Mon Dec 30 2019 - 06:30:04 PST
This period: Most recent messages
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Re: [AMBER] sequence command ankita mehta (Mon Dec 02 2019 - 02:15:44 PST)
1. Screenshot_1.png (197682 bytes)
2. Screenshot_2.png (128711 bytes)
[AMBER] Segmentation Fault when running constant pH Replica Exchange on GPUs Hofer, Florian (Fri Dec 06 2019 - 07:52:01 PST)
1. logfile_sigsegv.dat (13626 bytes)
Re: [AMBER] Problems adding molecule on Metal-Water system Lucas Bandeira (Sun Dec 08 2019 - 16:59:40 PST)
1. AmberGlyceroxide.pdb (1141 bytes)
2. interfaceNaOH.pdb (284835 bytes)
Re: [AMBER] Problems adding molecule on Metal-Water system Lucas Bandeira (Thu Dec 12 2019 - 06:19:09 PST)
1. interfaceNaOH.pdb (284890 bytes)
2. AmberGlyceroxide.pdb (1147 bytes)
[AMBER] Flexible protein! Debarati DasGupta (Thu Dec 12 2019 - 10:26:20 PST)
1. 4A17B482BAE04453B0FE9F4B69D3DC47.png (22315 bytes)
[AMBER] MM-GBSA error Rui Chen (Thu Dec 12 2019 - 18:31:57 PST)
1. 245343.out (1717 bytes)
2. _MMPBSA_gb.mdin (72 bytes)
3. gbsa_script.dms (1100 bytes)
[AMBER] question about Tleap Rui Chen (Mon Dec 16 2019 - 10:19:27 PST)
1. files.zip (248051 bytes)
[AMBER] Minimization equilibration of protein+ligand prior to TI setup Debarati DasGupta (Mon Dec 23 2019 - 12:33:03 PST)
1. 1A_solvmin.1.in (476 bytes)
2. 1B_allmin.1.in (179 bytes)
3. 1C_min.in (194 bytes)
4. 1D_min.in (160 bytes)
5. 2A_heating1.1.in (741 bytes)
6. 2B_heating2.1.in (349 bytes)
7. 2C_heating3.1.in (349 bytes)
8. 2D_heating4.1.in (352 bytes)
9. 3A_equilibrate.1.in (326 bytes)
10. bb1.1.in (335 bytes)
11. bb2.1.in (335 bytes)
12. bb3.1.in (335 bytes)
13. 3E_equilibratef.1.in (323 bytes)
[AMBER] Tleap naming problem Rui Chen (Wed Dec 25 2019 - 19:53:49 PST)
1. files.zip (329341 bytes)