OK. I've added this line but I keep with the same problem:
GetPDB >> Found 5178 atoms in interfaceNaOH.pdb.
GetPDB >> Bracketed 2708 residues.
GetPDB >> Found 13 atoms in AmberGlyceroxide.pdb.
GetPDB >> Bracketed 1 residues.
AddToBox >> Examining residue 0
AddToBox >> Added 0 residues.
On Mon, Dec 9, 2019 at 2:46 PM David Case <david.case.rutgers.edu> wrote:
> On Fri, Dec 06, 2019, Lucas Bandeira wrote:
> >
> > AddToBox -c interfaceNaOH.pdb -a NaOHGlycerol/AmberGlyceroxide.pdb -na 10
> >-P 5178 -o interfaceGlycerol.pdb -RW 2.5 -RP 2.5 -G 0.1 -V
>
> Here's what I get with your input files:
>
> dirac% AddToBox -c interfaceNaOH.pdb -a AmberGlyceroxide.pdb -na 10 -P
> 5178 -o interfaceGlycerol.pdb -RW 2.5 -RP 2.5 -G 0.1 -V
> pdbRead >> Error. PDB file must contain CRYST1 card!
>
> Is it possible that the "interfaceNaOH.pdb" file you sent is not the one
> you actually used? (I don't see any CRYST1 card. Note that this card
> needs to have the unit cell parameters, not just the letters "CRYST1").
>
> ....dac
>
>
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Received on Thu Dec 12 2019 - 06:30:03 PST
