Amber Archive Aug 2019: by messages with attachments

[AMBER] error during the calculation of MMPBSA Jeyaram R A (Tue Aug 06 2019 - 06:03:44 PDT)
1. lig_sia.pdb (3551 bytes)
Re: [AMBER] error during the calculation of MMPBSA Jeyaram R A (Tue Aug 06 2019 - 09:51:51 PDT)
1. mmpbsa.in (150 bytes)
Re: [AMBER] Imaging-rst file error Hira Jabeen (Wed Aug 07 2019 - 05:56:44 PDT)
1. 1m40_mem.rst (640652 bytes)
Re: [AMBER] Imaging-rst file error Hira Jabeen (Wed Aug 07 2019 - 06:51:30 PDT)
1. 1m40_mem.rst (640652 bytes)
Re: [AMBER] How to calculate the tilt angle of TM helix Prajwal Nandekar (Fri Aug 09 2019 - 21:56:17 PDT)
1. calc_TM_angle.vmd.vmd (900 bytes)
[AMBER] Problem for the frcmod file from the amber tutorial 辛志宏 (Tue Aug 13 2019 - 09:14:27 PDT)
1. sustiva.frcmod (501 bytes)
2. sustiva.mol2 (3190 bytes)
[AMBER] probelm -- QMMM-MD with ZN（Znic atom）in QM region 东庚 (Wed Aug 14 2019 - 23:20:20 PDT)
1. qmmmmd.tgz (201099 bytes)
[AMBER] mismatch between parm files from CHARMM-GUI and chamber Quynh Vo (Fri Aug 16 2019 - 17:13:52 PDT)
1. smime.p7s (1373 bytes)
[AMBER] probelm -- QMMM-MD with ZN（Znic atom）in QM region 东庚 (Fri Aug 16 2019 - 19:10:11 PDT)
1. qmmmmd.tgz (201099 bytes)
[AMBER] Amber installation error Vivek Junghare (Mon Aug 19 2019 - 00:57:09 PDT)
1. 08-19_13-06-15.png (370698 bytes)
[AMBER] Graphene residue name Tleap Nora Kremer (Mon Aug 19 2019 - 01:03:12 PDT)
1. graphen_wat1.pdb (263251 bytes)
2. graphene.in (255 bytes)
[AMBER] PDB file carbohydrates naming problem Rui Chen (Tue Aug 20 2019 - 20:43:45 PDT)
1. 1I8LA.in (713 bytes)
2. leap.log (146203 bytes)
3. 1I8LA_Amber2.pdb (286637 bytes)
Re: [AMBER] PDB file carbohydrates naming problem Rui Chen (Tue Aug 20 2019 - 21:32:14 PDT)
1. 08-20_at_10.23.18_PM.png (83685 bytes)
Re: [AMBER] PDB file carbohydrates naming problem Rui Chen (Wed Aug 21 2019 - 16:02:22 PDT)
1. 08-21_at_4.29.20_PM.png (96692 bytes)
[AMBER] Error "forrtl: severe (174) : SIGSEGV, segmentation fault" while running MD simulation production run Leena Aggarwal (Tue Aug 27 2019 - 07:02:15 PDT)
1. out.txt (19931 bytes)
[AMBER] MAWS/Amber and python program adjustment Bruno Cramer (Tue Aug 27 2019 - 15:53:53 PDT)
1. MAWS_rev1.py (53544 bytes)
[AMBER] Small molecule break after minimization Amen Shamim (Fri Aug 30 2019 - 06:16:46 PDT)
1. THMP.frcmod (2517 bytes)
2. THMP.pdb (1946 bytes)
[AMBER] equilirbration at constant volume Sadaf Rani (Fri Aug 30 2019 - 07:48:24 PDT)
1. Heat.out (16762 bytes)
Re: [AMBER] PDB file carbohydrates naming problem Rui Chen (Fri Aug 30 2019 - 14:37:52 PDT)
1. 08-30_at_3.37.15_PM.png (19990 bytes)
2. 1I8LA.in (711 bytes)

Amber Archive Aug 2019 by messages with attachments