The problem is solved by doing configuration in the following way.
./configure --with-python /usr/bin/python/ gnu
But getting another problem during compilation. I checked my python version
which is 2.6.6. I will try with Phython 2.7 now.
===============
You must have at least Python 2.7 for ParmEd to work correctly.
make[2]: *** [parmed] Error 1
make[2]: Leaving directory
`/home/external/cbs/sunitap/softwares/amber18/AmberTools/src'
make[1]: *** [serial] Error 2
make[1]: Leaving directory
`/home/external/cbs/sunitap/softwares/amber18/AmberTools/src'
make: *** [install] Error 2
==============
[sunitap.ycn2 amber18]$ python --version
Python 2.6.6
Sunita
On Fri, Aug 9, 2019 at 12:13 PM Sunita Patel <sunita.patel.cbs.ac.in> wrote:
> Dear AMBER-users,
>
> I am too having similar problem during installation of AMBER18 on two
> different servers. I also tried to install in different times. Still
> getting the similar problem.
> Please suggest the solution.
>
> Thanks in advance for your help.
> Sunita
>
> ===============================
> This script will download and install a version of Python compatible
> with every component of AmberTools and install all required and optional
> prerequisites. The Python distribution is downloaded for your operating
> system from Miniconda.
>
> Downloading Python 2.7 Miniconda
> Detected Linux kernel. Downloading the Linux installer
> Downloading the latest Miniconda distribution
> Detected 64-bit Linux
> --2019-08-09 12:13:06--
> https://repo.continuum.io/miniconda/Miniconda2-4.3.21-Linux-x86_64.sh
> Resolving repo.continuum.io... failed: Name or service not known.
> wget: unable to resolve host address `repo.continuum.io'
> Problem installing Miniconda... see error above.
> Configure failed due to the errors above!
>
>
> On Thu, Aug 8, 2019 at 9:11 PM David A Case <david.case.rutgers.edu>
> wrote:
>
>> On Thu, Aug 08, 2019, Elvis Martis wrote:
>>
>> >I am trying to install AMBERTools19 and facing a problem while installing
>> >miniconda.
>> >Connecting to repo.continuum.io|104.18.201.79|:443... connected.
>> >ERROR: certificate common name “ssl468915.cloudflaressl.com” doesn’t
>> match
>> >requested host name “repo.continuum.io”.
>> >To connect to repo.continuum.io insecurely, use
>> ‘--no-check-certificate’.
>>
>> Please try again after a while. The problem arises from continuum, and
>> we have occasionally seen this before.
>>
>> ...dac
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>
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Received on Fri Aug 09 2019 - 02:00:02 PDT
