By .trj do you mean the Gromacs trr format?
If so, just do:
cpptraj -p <amber topology> -y <amber trajectory> -x output.trr
-Dan
On Fri, Jun 15, 2018 at 9:02 AM, ATUL KUMAR <atul44_sit.jnu.ac.in> wrote:
> Dear amber users,
> I want to convert my amber trajectory (md1.mdcrd) to .trj trajectory
> format. Can anyone help me with that?
> Your help is highly appreciated.
>
> *Atul Kuamr jaiswal*
> Research Scholar
> School of Computational and Integrative Sciences
> Centre for Computational Biology and Bioinformatics (CCBB)
> JNU,New Delhi
> India.
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Received on Fri Jun 15 2018 - 10:00:03 PDT