You are right.The commands should be in two steps. I have got the nuc.pdb now.
Thanks.
At 2016-02-24 11:46:52, "Hai Nguyen" <nhai.qn.gmail.com> wrote:
>no, your commands were not right.
>
>there are two steps
>
>nab nuc.nab
>
>./a.out
>
>Hai
>
>On Tue, Feb 23, 2016 at 10:39 PM, yhzahsc <yhzahsc.163.com> wrote:
>
>> command: nab nuc.out ./a.out
>> output:a.out ;nuc.c
>>
>>
>>
>>
>>
>>
>>
>>
>> At 2016-02-24 10:42:27, "Robert Molt" <rwmolt07.gmail.com> wrote:
>> >Perhaps you should give the specific commands and outputs?
>> >
>> >On 2/23/16 9:40 PM, yhzahsc wrote:
>> >> I run it,but no pdb is produced
>> >>
>> >>
>> >> ·¢×Ô ÍøÒ×ÓÊÏä´óʦ
>> >> ÔÚ2016Äê02ÔÂ24ÈÕ 10:15£¬nhai.wn дµÀ:
>> >> did you run?
>> >>
>> >> ./a.out
>> >>
>> >> hai
>> >>
>> >>> On Feb 23, 2016, at 9:04 PM, yhzahsc <yhzahsc.163.com> wrote:
>> >>>
>> >>> Dear all,
>> >>>
>> >>>
>> >>>
>> >>> I have a problem when using nab to build a bDNA (working with
>> Amber14).Competely following the Tutorial B1(
>> http://ambermd.org/tutorials/basic/tutorial1/section2.htm), it just
>> produces two files(a.out and nuc.c) but no PDB file(nuc.pdb).
>> >>> I have no idea where is the problem, please give me some help!!
>> >>>
>> >>>
>> >>>
>> >>> Thanks!
>> >>>
>> >>>
>> >>> _______________________________________________
>> >>> AMBER mailing list
>> >>> AMBER.ambermd.org
>> >>> http://lists.ambermd.org/mailman/listinfo/amber
>> >> _______________________________________________
>> >> AMBER mailing list
>> >> AMBER.ambermd.org
>> >> http://lists.ambermd.org/mailman/listinfo/amber
>> >> _______________________________________________
>> >> AMBER mailing list
>> >> AMBER.ambermd.org
>> >> http://lists.ambermd.org/mailman/listinfo/amber
>> >
>> >--
>> >Dr. Robert Molt Jr.
>> >r.molt.chemical.physics.gmail.com
>> >
>> >
>> >_______________________________________________
>> >AMBER mailing list
>> >AMBER.ambermd.org
>> >http://lists.ambermd.org/mailman/listinfo/amber
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>>
>_______________________________________________
>AMBER mailing list
>AMBER.ambermd.org
>http://lists.ambermd.org/mailman/listinfo/amber
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Feb 23 2016 - 20:30:02 PST
