Re: [AMBER] 回复:Re: Nucleic acid builder

From: Hai Nguyen <nhai.qn.gmail.com>
Date: Tue, 23 Feb 2016 22:46:52 -0500

no, your commands were not right.

there are two steps

nab nuc.nab

./a.out

Hai

On Tue, Feb 23, 2016 at 10:39 PM, yhzahsc <yhzahsc.163.com> wrote:

> command: nab nuc.out ./a.out
> output:a.out ;nuc.c
>
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> At 2016-02-24 10:42:27, "Robert Molt" <rwmolt07.gmail.com> wrote:
> >Perhaps you should give the specific commands and outputs?
> >
> >On 2/23/16 9:40 PM, yhzahsc wrote:
> >> I run it,but no pdb is produced
> >>
> >>
> >> 发自 网易邮箱大师
> >> 在2016年02月24日 10:15,nhai.wn 写道:
> >> did you run?
> >>
> >> ./a.out
> >>
> >> hai
> >>
> >>> On Feb 23, 2016, at 9:04 PM, yhzahsc <yhzahsc.163.com> wrote:
> >>>
> >>> Dear all,
> >>>
> >>>
> >>>
> >>> I have a problem when using nab to build a bDNA (working with
> Amber14).Competely following the Tutorial B1(
> http://ambermd.org/tutorials/basic/tutorial1/section2.htm), it just
> produces two files(a.out and nuc.c) but no PDB file(nuc.pdb).
> >>> I have no idea where is the problem, please give me some help!!
> >>>
> >>>
> >>>
> >>> Thanks!
> >>>
> >>>
> >>> _______________________________________________
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> >
> >--
> >Dr. Robert Molt Jr.
> >r.molt.chemical.physics.gmail.com
> >
> >
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Received on Tue Feb 23 2016 - 20:00:08 PST
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