Hi again,
I have run the following code to test the amber installation,
Cd Users
tar xvfj AmberTools15.tar.bz2 # (Note: extracts in an # “amber14” directory)
export AMBERHOME=/Users/amber14 # (for bash, zsh, ksh, etc.)
cd $AMBERHOME
./configure –help
./configure gnu
source /users/amber14/amber.sh # for bash, zsh, ksh, etc.
make install
make test
and it seems that there are no errors!
The final sentences of the test code are as follows:
Installation of AmberTools14 serial is complete at Tue Feb 23 14:23:54 CET 2016.
==============================================================
/Users/amber14/src/Makefile not found, or -noamber was set.
This is expected if you do not have Amber14.
==============================================================
MHA:amber14 mha$ make test
I don't know what could be the reason behind the past mentioned error :(
________________________________________
From: David A Case [david.case.rutgers.edu]
Sent: Tuesday, February 23, 2016 1:52 PM
To: AMBER Mailing List
Subject: Re: [AMBER] No exe file in Amberhome
On Tue, Feb 23, 2016, Mahdieh Hadi wrote:
>
> dyld: Library not loaded: /Users/mha/amber14/lib/libfftw3.3.dylib
> Referenced from: /Users/amber14/./a.out
> Reason: image not found
> Trace/BPT trap: 5
This looks like a problem with the AmberTools installation. I'd suggest that
you re-configure and compile, and look carefully for errors related to fftw3.
Also, be sure to run the test cases: given the problem above, it seems likely
that all the nab-based test cases will fail. It makes a big difference in the
sorts of advice we give if we know whether you have a working AmberTools
installation or not.
....good luck....dac
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Received on Tue Feb 23 2016 - 05:30:04 PST
