Re: [AMBER] mac hangs when compile ambertools15 on El capitan

From: Yong Yao <yongyao.sbpdiscovery.org>
Date: Tue, 1 Dec 2015 04:54:28 +0000

I have waited for more than 10 hours. I think it hangs at building Netcdf because the log file shows it does not pass the check make sets step.
Yong


-------- Original message --------
From: Hai Nguyen <nhai.qn.gmail.com>
Date:11/30/2015 8:39 PM (GMT-08:00)
To: AMBER Mailing List <amber.ambermd.org>
Cc:
Subject: Re: [AMBER] mac hangs when compile ambertools15 on El capitan

Hi

I think the stdout saying 'may be time-consuming)', so you might need to
wait a bit longer for NetCDF building.

Hai

On Mon, Nov 30, 2015 at 10:13 PM, Yong Yao <yongyao.sbpdiscovery.org> wrote:

> Hi Amber users
>
> I tried to compile ambertools15 on my MBP with OS X El Caption. I followed
> Jason's instructions and installed gcc49 using macport. After I type
> "configure -macAccelerate gnu", the configuration hangs at
> "Checking NetCDF
> Using bundled NetCDF library.
> Starting NetCDF build.
> Configuring NetCDF C interface (may be time-consuming)...
> "
> If I go to the src directory, there is a file netcdf_config.log. the last
> line is:
> "checking whether make sets $(MAKE)..."
>
>
> Any ideas?
>
> Thanks.
>
> Yong
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Received on Mon Nov 30 2015 - 21:00:04 PST
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