On Mon, Oct 26, 2015 at 10:01 AM, Hadeer ELHabashy <
hadeer.elhabashi.gmail.com> wrote:
> same directory of $AMBERHOME
>
You can't install Amber 12 and AmberTools 15 in the same place and expect
it to work (I have no idea *what* to expect in this situation). See
http://jswails.wikidot.com/installing-ambertools-14-and-older-amber for
more instructions on how to get Amber 12 and AmberTools 15 to coexist
peacefully.
Note that since you unpacked AmberTools 15 into your amber12 directory, you
have effectively polluted and destroyed AmberTools 13 (which Amber 12 needs
in order to build). You may have to delete the whole directory and
reinstall completely if you ever need to recompile pmemd.
Good luck,
Jason
--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Mon Oct 26 2015 - 07:30:07 PDT
