Amber Archive Nov 2013 by messages with attachments
414 messages
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Starting
Thu Oct 31 2013 - 21:00:02 PDT,
Ending
Sat Nov 30 2013 - 09:00:03 PST
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[AMBER] Sulfonamide parameters,
loue chen
(Sat Nov 02 2013 - 23:16:55 PDT)
PDB__Mol2__frcmod.zip
(4842 bytes)
[AMBER] Temperature raises abnormally during accelerated MD
O Z
(Sun Nov 03 2013 - 23:41:07 PST)
temp.jpg
(34915 bytes)
Re: [AMBER] Sulfonamide parameters,
Hector A. Baldoni
(Mon Nov 04 2013 - 14:00:49 PST)
derivatives.frcmod
(986 bytes)
Re: [AMBER] Sulfonamide parameters,
Karl N. Kirschner
(Tue Nov 05 2013 - 02:31:54 PST)
s6-ca_benezesulfanamide.png
(11009 bytes)
s6-ca_opt_benezesulfanamide.png
(11646 bytes)
n3-s6-x_benezesulfanamide.png
(14258 bytes)
Re: [AMBER] about rms atomic fluctuation for protein crystal .thank you very much!
Yongxiu Li
(Fri Nov 08 2013 - 01:19:40 PST)
RevSym_mod.py
(4192 bytes)
3.png
(19904 bytes)
2.png
(19113 bytes)
1.png
(17050 bytes)
[AMBER] creation of disulfide bonds
Beale, John
(Fri Nov 08 2013 - 02:18:57 PST)
image001.jpg
(23871 bytes)
Re: [AMBER] MMPBSA errors: "failed with prmtop" and "failed when querying netcdf trajectory"
Jason Swails
(Tue Nov 12 2013 - 05:17:09 PST)
mmpbsa_errormsg.patch
(1323 bytes)
Re: [AMBER] hexagonal unit cell for membrane simulation with NAMD
Pawel
(Tue Nov 12 2013 - 07:41:59 PST)
9_hexagonal_boxes.png
(358570 bytes)
one_hexagonal_box.png
(186840 bytes)
[AMBER] Bug in ptraj (Ambertools 13 patch 20)
Åke Sandgren
(Mon Nov 18 2013 - 09:08:23 PST)
AT-p34-fix-uninit-first-ptraj.c
(439 bytes)
AT-p35-fix-declaration-of-ptraj-safe_malloc
(479 bytes)
AT-p36-handle-large-memory-requirements
(2089 bytes)
Re: [AMBER] gpu_download_partial_forces: download failed unspecified launch failure
Ashutosh Shandilya
(Tue Nov 19 2013 - 07:47:48 PST)
issue.png
(58330 bytes)
Re: [AMBER] README under pmemd/src?
Ross Walker
(Tue Nov 19 2013 - 10:35:28 PST)
README
(21934 bytes)
[AMBER] RTIL simulation
Saeed Nasiri
(Wed Nov 20 2013 - 05:09:35 PST)
leap.log
(220422 bytes)
bf4.mol2
(585 bytes)
Re: [AMBER] Temperature raises abnormally during accelerated MD
O Z
(Thu Nov 21 2013 - 17:29:42 PST)
script-test1
(568 bytes)
script-test2
(627 bytes)
test1.err
(2698 bytes)
test2.err
(2728 bytes)
Re: [AMBER] SQM file format
Brian Radak
(Fri Nov 22 2013 - 11:41:48 PST)
xyz2sqm
(5211 bytes)
Last message date
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Sat Nov 30 2013 - 09:00:03 PST
Archived on
: Sun Jan 05 2025 - 05:54:55 PST
414 messages
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