I mean whether the N-terminal NH2 would be treated as NH2 or NH3+, and whether the C-terminal COOH would be treated as COOH or COO-.
Looking forward to getting your reply.
Cheers,
Acoot
________________________________
From: Carlos Simmerling <carlos.simmerling.gmail.com>
To: AMBER Mailing List <amber.ambermd.org>; Acoot Brett <acootbrett.yahoo.com>
Sent: Monday, 2 April 2012 8:02 AM
Subject: Re: [AMBER] a question related to force field
Can you be more specific about the question?
On Apr 1, 2012 6:00 PM, "Acoot Brett" <acootbrett.yahoo.com> wrote:
> Dear All,
>
> Will you please tell me how Amber forcefields treat the N-termijnal and
> C-terminal residues?
>
> Cheers,
>
> Acoot
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> AMBER.ambermd.org
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Received on Sun Apr 01 2012 - 15:30:03 PDT
