Hi All,
I intend to install Amber 11 with AmberTools 1.5 but I'm getting the following error after I try to make install. I did the configuration using the gnu flag.
"
In file included from sff.c:859:
eff.c: In function ‘mme34’:
eff.c:4242: warning: passing argument 3 of ‘rism_thermo_’ from incompatible pointer type
sff.h:215: note: expected ‘double *’ but argument is of type ‘double (*)[20]’
In file included from sff.c:2278:
mm_options.l: In function ‘mmolex’:
mm_options.l:31: error: ‘hcp_h’ undeclared (first use in this function)
mm_options.l:31: error: (Each undeclared identifier is reported only once
mm_options.l:31: error: for each function it appears in.)
In file included from sff.c:2278:
mm_options.l:139: error: ‘cutres’ undeclared (first use in this function)
make[1]: *** [sff.o] Error 1
make[1]: Leaving directory `/home/maziar/Programs/amber11/AmberTools/src/sff'
make: *** [serial] Error 2
"
The problem should be similar to what has been reported here:
http://archive.ambermd.org/201105/0493.html<
http://archive.ambermd.org/201105/0448.html>
and here:
http://archive.ambermd.org/201105/0150.html
This is a fresh install on an Intel Xeon machine with the following OS and compilers:
CentOS Linux release 6.0 (Final) (Linux 2.6.32-131.12.1.el6.i686)
flex 2.5.35
gcc (GCC) 4.4.5 20110214 (Red Hat 4.4.5-6)
Any help and guidance is much appreciated.
Regards,
Maziar
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Received on Fri Oct 07 2011 - 03:30:03 PDT
