Re: [AMBER] problem in installing xleap

From: sonali dhindwal <sonali11dhindwal.yahoo.co.in>
Date: Wed, 31 Aug 2011 19:28:08 +0530 (IST)

Dear Case,

Thanks for the reply.

I have 32 bit ubuntu on my system.
 
by running command
ls -l xaLeap
it is giving :
ls: cannot access xaleap: No such file or directory

and it may sound silly but i don't know how to apply patch,
it will be very kind of you to please tell how to apply the same.

Regards

-- 
Sonali Dhindwal
“Live as if you were to die tomorrow. Learn as if you were to live forever.”
--- On Wed, 31/8/11, David A Case <case.biomaps.rutgers.edu> wrote:
From: David A Case <case.biomaps.rutgers.edu>
Subject: Re: [AMBER] problem in installing xleap
To: "AMBER Mailing List" <amber.ambermd.org>
Date: Wednesday, 31 August, 2011, 5:59 PM
On Wed, Aug 31, 2011, sonali dhindwal wrote:
> 
> I am trying to install amber11 on ubuntu operating system.
Can you say which version of ubuntu you are using?  Is it 32-bit or 64-bit?
> While running xleap,
> it gives following error,
It is possible that xleap was not correctly built.  What is the result of the
following:
cd $AMBERHOME
ls -l xaLeap
> 
> I checked $AMBERHOME/dat/XaLeap_wcl file, it is of zero bytes.
This sounds like a re-install is required.  Try applying the attached patch
file to $AMBERHOME/AmberTools/src/configure -- you may have to apply it by
hand.  The re-configure, type "make clean", cd to leap and type "make
install".  Look carefully for any error messages.
....dac
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Received on Wed Aug 31 2011 - 07:00:03 PDT