Amber Archive Aug 2010 by messages with attachments
712 messages
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Starting
Sat Jul 31 2010 - 13:00:03 PDT,
Ending
Tue Aug 31 2010 - 23:30:03 PDT
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[AMBER] Solid surface simulation in Amber - the recommended approach ?
Marek Maly
(Tue Aug 03 2010 - 11:35:28 PDT)
Illustrations.png
(813005 bytes)
prod_HA_PU.in
(257 bytes)
density_HA_PU.in
(246 bytes)
heat_HA_PU.in
(329 bytes)
min1_HA_PU.in
(147 bytes)
min2_HA_PU.in
(130 bytes)
Re: [AMBER] Solid surface simulation in Amber
Marek Maly
(Tue Aug 03 2010 - 15:23:34 PDT)
OUT_files.zip
(531286 bytes)
HA_End_01.jpg
(200099 bytes)
HA_End_02.jpg
(260164 bytes)
HA_Start_01.jpg
(187250 bytes)
HA_Start_02.jpg
(274215 bytes)
[AMBER] SASA over trajectory
Beale, John
(Mon Aug 09 2010 - 07:58:22 PDT)
image001.jpg
(23871 bytes)
[AMBER] determining closest water molecules
Beale, John
(Tue Aug 10 2010 - 08:51:53 PDT)
image001.jpg
(23871 bytes)
Re: [AMBER] Amber: saveamberparm error
Karan Mehra
(Wed Aug 11 2010 - 12:38:11 PDT)
ctx.pdb
(89748 bytes)
[AMBER] Bug in MMPBSA.py.MPI
Matthias Negri
(Wed Aug 11 2010 - 17:05:36 PDT)
m_negri.vcf
(644 bytes)
Re: [AMBER] How to change temperature in mm_pbsa.pl script
pxq
(Thu Aug 12 2010 - 07:52:49 PDT)
pl.out
(56955 bytes)
mmpbsa_py.out
(3575 bytes)
pl_statistics.out
(2125 bytes)
mmpbsa_py.in
(431 bytes)
[AMBER] problem of NM calculations
fancy2012
(Fri Aug 13 2010 - 06:01:27 PDT)
entropy.out
(12186 bytes)
Re: [AMBER] entropy calculations MMPBSA.py.MPI
Matthias Negri
(Tue Aug 17 2010 - 15:45:34 PDT)
files_mmpbsa.tar.gz
(410363 bytes)
m_negri.vcf
(644 bytes)
[AMBER] Trivial syntax problem ?
Marek Maly
(Wed Aug 18 2010 - 13:29:43 PDT)
heat_HA_PU.out
(7234 bytes)
[AMBER] bond energy spikes in conjugent gradient minimization
Vickie Roberts
(Fri Aug 20 2010 - 00:55:21 PDT)
energy.all.jpg
(84697 bytes)
[AMBER] exchange probability in remd
Lekpa Duukori
(Fri Aug 20 2010 - 10:14:40 PDT)
highest.temp.txt
(284219 bytes)
[AMBER] [Fwd: Re: Interaction energy_mm_pbsa]
moitrayee.mbu.iisc.ernet.in
(Mon Aug 23 2010 - 04:35:40 PDT)
decomp.in
(5680 bytes)
Re: [AMBER] Equilibration
M. Reza Ganjalikhany
(Mon Aug 23 2010 - 13:03:15 PDT)
NO.1.jpg
(38380 bytes)
NO.2.jpg
(35333 bytes)
Re: [AMBER] Problem: ambertool1.2 mopac is ok for my molecules, but ambertool1.4 sqm fails
Shulin Zhuang
(Mon Aug 23 2010 - 18:20:43 PDT)
4.pdb
(4285 bytes)
[AMBER] loading MG.off (./MG.off is not a valid database)
Ehsan Habibi
(Tue Aug 24 2010 - 01:16:48 PDT)
MG.off
(1093 bytes)
[AMBER] REĀ : Regarding protein diffusion
ABEL Stephane 175950
(Mon Aug 30 2010 - 07:04:33 PDT)
winmail.dat
(4529 bytes)
[AMBER] addions2 function missing from sleap
Ben Roberts
(Mon Aug 30 2010 - 17:15:14 PDT)
smime.p7s
(2674 bytes)
Last message date
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Tue Aug 31 2010 - 23:30:03 PDT
Archived on
: Wed Oct 09 2024 - 05:54:10 PDT
712 messages
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