Hello all,
I had this working in ubuntu 9.10 but since I upgraded to 10.04 I get the
following
after running the amber_test_cuda.sh script...
#############################AMBER TEST##############################
Using default GPU_ID = -1
Using default PREC_MODEL = SPDP
cd cuda && make -k test.pmemd.cuda GPU_ID=-1 PREC_MODEL=SPDP
make[1]: Entering directory `/net/home/lpierce/amber11gnu/test/cuda'
------------------------------------
Running CUDA Implicit solvent tests.
Precision Model = SPDP
GPU_ID = -1
------------------------------------
cd gb_ala3/ && ./Run.igb1_ntc1_min -1 SPDP netcdf.mod
Segmentation fault
./Run.igb1_ntc1_min: Program error
make[1]: *** [test.pmemd.cuda.gb] Error 1
------------------------------------
Running CUDA Explicit solvent tests.
Precision Model = SPDP
GPU_ID = -1
------------------------------------
cd 4096wat/ && ./Run.pure_wat -1 SPDP netcdf.mod
Segmentation fault
./Run.pure_wat: Program error
make[1]: *** [test.pmemd.cuda.pme] Error 1
make[1]: Target `test.pmemd.cuda' not remade because of errors.
make[1]: Leaving directory `/net/home/lpierce/amber11gnu/test/cuda'
make: *** [test.pmemd.cuda] Error 2
make: Target `test.serial.cuda' not remade because of errors.
0 file comparisons passed
0 file comparisons failed
7 tests experienced errors
Test log file saved as logs/test_amber_cuda/2010-05-31_15-12-02.log
No test diffs to save!
##############NVIDIA DEVICE QUERY####################
CUDA Device Query (Runtime API) version (CUDART static linking)
There is 1 device supporting CUDA
Device 0: "GeForce GTX 470"
CUDA Driver Version: 3.0
CUDA Runtime Version: 3.0
CUDA Capability Major revision number: 2
CUDA Capability Minor revision number: 0
Total amount of global memory: 1341325312 bytes
Number of multiprocessors: 14
Number of cores: 448
Total amount of constant memory: 65536 bytes
Total amount of shared memory per block: 49152 bytes
Total number of registers available per block: 32768
Warp size: 32
Maximum number of threads per block: 1024
Maximum sizes of each dimension of a block: 1024 x 1024 x 64
Maximum sizes of each dimension of a grid: 65535 x 65535 x 1
Maximum memory pitch: 2147483647 bytes
Texture alignment: 512 bytes
Clock rate: 1.22 GHz
Concurrent copy and execution: Yes
Run time limit on kernels: Yes
Integrated: No
Support host page-locked memory mapping: Yes
Compute mode: Default (multiple host
threads can use this device simultaneously)
deviceQuery, CUDA Driver = CUDART, CUDA Driver Version = 4248883, CUDA
Runtime Version = 3.0, NumDevs = 1, Device = GeForce GTX 470
PASSED
###########################MY NOTES##################################
I dropped in a GTX275 and it works fine. I also have another machine that
I installed
10.04 on and I have a GTX480 which works fine in it. The kernel is
2.6.32-21 and I also
tried the 2.6.32-22. I tried both gcc-4.4 and gcc-4.3 compilers...any
ideas?
Thanks,
~Levi
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Received on Mon May 31 2010 - 15:30:04 PDT
