Thanks!
On May 14, 2010, at 11:41 AM, Jason Swails wrote:
> On Fri, May 14, 2010 at 11:23 AM, erik zuiderweg
> <zuiderwe.umich.edu> wrote:
>
>> Thanks.
>>
>> This is what I get when entering these commands.
>>
>> [users-macbook-pro:~] erikzuiderweg% gcc -v
>>
>> Using built-in specs.
>> Target: i686-apple-darwin10
>> Configured with: /var/tmp/gcc/gcc-5646~6/src/configure --disable-
>> checking
>> --enab
>>
>> le-werror --prefix=/usr --mandir=/share/man
>> --enable-languages=c,objc,c++,obj-c+
>> + --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/
>> usr/lib
>> --bui
>> ld=i686-apple-darwin10 --with-gxx-include-dir=/include/c++/4.2.1
>> --program-prefi
>>
>> x=i686-apple-darwin10- --host=x86_64-apple-darwin10
>> --target=i686-apple-darwin10
>> Thread model: posix
>> gcc version 4.2.1 (Apple Inc. build 5646)[users-macbook-pro:~]
>>
>>
>> erikzuiderweg% gfortran -v
>> Using built-in specs.
>> Target: i386-apple-darwin9.7.0
>> Configured with: ./configure --enable-languages=fortran
>> Thread model: posix
>> gcc version 4.4.1 20090623 (prerelease) (GCC)
>>
>>
>>
>>
>>
>> Note: I did upgrade to OS10.6 AFTER I installed the compilers --
>> maybe that
>> is the issue..
>>
>
> You upgraded to 10.6 after you installed the compilers? This could
> likely
> be an issue, as the OS received a makeover and is quite different
> than past
> versions (i.e., 64-bit support). I would remove the versions
> installed
> under Leopard and re-install gcc/gfortran from macports (or fink,
> but I
> typically use macports). Again, Mengjuei's blog (amberonmac) is a
> good
> step-by-step walkthrough of how to successfully run amber/ambertools
> on
> mac. Installing Amber on the mac is painless... the painful part is
> setting
> up the compilers so that it becomes painless :).
>
> Good luck!
> Jason
>
>
>>
>>
>>
>>
>>
>> On May 13, 2010, at 6:58 PM, Mengjuei Hsieh wrote:
>>
>> On Thu, May 13, 2010 at 1:52 PM, erik zuiderweg <zuiderwe.umich.edu>
>>> wrote:
>>>
>>>> I am trying to install Ambertools1.4 on a Intel MacbookPro ,
>>>> running Os
>>>> 10.6.
>>>> using the bash shell
>>>> I have the gnu compilers installed.
>>>>
>>>> The configuration file is failing, WARNING: Unable to compile mixed
>>>> C/Fortran code. (see attached log)
>>>>
>>>> The installation is failing because of a missing
>>>> /usr/local/amber11/lib/arpack.a file
>>>>
>>>
>>> Dear Erik,
>>>
>>> The later errors on arpack: "make[1]: Nothing to be done for
>>> `install'." is probably due to the fact your configure script didn't
>>> finish successfully. So we should focus on the fact your gfortran
>>> seems to be not working.
>>>
>>> We can start from the versions of your c and fortran compilers to
>>> solve the issues. You can use these two commands to get those
>>> information: "gcc -v" and "gfortran -v". It also will be very
>>> helpful
>>> if you can tell us what did you do to install the fortran compiler.
>>>
>>> Best,
>>> --
>>> Mengjuei
>>>
>>>
>>> _______________________________________________
>>> AMBER mailing list
>>> AMBER.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>
>>>
>>>
>>
>> _______________________________________________
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>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>
>
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Graduate Student
> 352-392-4032
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
>
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Received on Fri May 14 2010 - 09:30:06 PDT
