On Fri, May 14, 2010 at 11:23 AM, erik zuiderweg <zuiderwe.umich.edu> wrote:
> Thanks.
>
> This is what I get when entering these commands.
>
> [users-macbook-pro:~] erikzuiderweg% gcc -v
>
> Using built-in specs.
> Target: i686-apple-darwin10
> Configured with: /var/tmp/gcc/gcc-5646~6/src/configure --disable-checking
> --enab
>
> le-werror --prefix=/usr --mandir=/share/man
> --enable-languages=c,objc,c++,obj-c+
> + --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib
> --bui
> ld=i686-apple-darwin10 --with-gxx-include-dir=/include/c++/4.2.1
> --program-prefi
>
> x=i686-apple-darwin10- --host=x86_64-apple-darwin10
> --target=i686-apple-darwin10
> Thread model: posix
> gcc version 4.2.1 (Apple Inc. build 5646)[users-macbook-pro:~]
>
>
> erikzuiderweg% gfortran -v
> Using built-in specs.
> Target: i386-apple-darwin9.7.0
> Configured with: ./configure --enable-languages=fortran
> Thread model: posix
> gcc version 4.4.1 20090623 (prerelease) (GCC)
>
>
>
>
>
> Note: I did upgrade to OS10.6 AFTER I installed the compilers -- maybe that
> is the issue..
>
You upgraded to 10.6 after you installed the compilers? This could likely
be an issue, as the OS received a makeover and is quite different than past
versions (i.e., 64-bit support). I would remove the versions installed
under Leopard and re-install gcc/gfortran from macports (or fink, but I
typically use macports). Again, Mengjuei's blog (amberonmac) is a good
step-by-step walkthrough of how to successfully run amber/ambertools on
mac. Installing Amber on the mac is painless... the painful part is setting
up the compilers so that it becomes painless :).
Good luck!
Jason
>
>
>
>
>
> On May 13, 2010, at 6:58 PM, Mengjuei Hsieh wrote:
>
> On Thu, May 13, 2010 at 1:52 PM, erik zuiderweg <zuiderwe.umich.edu>
>> wrote:
>>
>>> I am trying to install Ambertools1.4 on a Intel MacbookPro , running Os
>>> 10.6.
>>> using the bash shell
>>> I have the gnu compilers installed.
>>>
>>> The configuration file is failing, WARNING: Unable to compile mixed
>>> C/Fortran code. (see attached log)
>>>
>>> The installation is failing because of a missing
>>> /usr/local/amber11/lib/arpack.a file
>>>
>>
>> Dear Erik,
>>
>> The later errors on arpack: "make[1]: Nothing to be done for
>> `install'." is probably due to the fact your configure script didn't
>> finish successfully. So we should focus on the fact your gfortran
>> seems to be not working.
>>
>> We can start from the versions of your c and fortran compilers to
>> solve the issues. You can use these two commands to get those
>> information: "gcc -v" and "gfortran -v". It also will be very helpful
>> if you can tell us what did you do to install the fortran compiler.
>>
>> Best,
>> --
>> Mengjuei
>>
>>
>> _______________________________________________
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>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>>
>>
>
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>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Fri May 14 2010 - 09:00:03 PDT
