Amber Archive Nov 1999 by subject
- (no subject)
- 10-12 potential option
- 3 or more body interaction.
- about setting up INITIAL STATE containing dummy atoms in FEP calc
- addles question
- Amber on alfa
- Cl parameters
- creating a box of solvent
- CT atom type in leap with the weiner ff
- Curve decomposition
- dipolar coupling restraints
- distance constraints
- distance restraint and ibelly
- DS10
- File conversion: Amber 5.0 to 4.1
- heme group
- how to find water in solute in a long trajectory?
- Input for 10-12 potential parameters.
- leap
- link
- MACHINE file to use
- MD-example, please?
- mdcrd and ptraj
- Mg2+ parameters
- minimization
- N3 vdW parameters
- optimizing link atoms in roar
- Peter Slickers
- Refining docking
- Regarding the maximum value of N3B
- Request for the bugfixes
- roar
- saving parameters in LEaP
- Size-Problem
- solvent box
- SPASM software...
- stream output
- visualization on DEC/COMPAQ ALPHA
- Last message date: Mon Nov 29 1999 - 15:20:36 PST
- Archived on: Mon Oct 14 2024 - 05:53:12 PDT