The "if" statement that is causing this is:
if (nat .gt. 150 .or. nbond .gt. 300 .or. ntheta .gt. 350 .or.
+ nphi .gt. 400 .or. next .gt. 600 .or. ic .gt. 400) goto 1000
so check your prep output for the values of each of these.
nat = number of atoms
nbond = total number of bonds
ntheta = " " " angles
nphi = " " " dihedrals
next = number of excluded atoms
ic ? appears to be the number of "move to"/"draw to" instructions.
good luck,
jim
On Wed, 3 Nov 1999, user1 wrote:
> I'm running link for a protein which contains an inhibitor, but the program
> stops with this message error:Residue HMM is too big (HMM is the inhibitor
> molecule, and it's only of 42 atoms). What should I do ?
>
> Thanks to everyone,
> Cristina Dezi
>
> --
>
------------------------------------------------------------------------
James W. Caldwell (voice) 415-476-8603
Department of Pharmaceutical Chemistry (fax) 415-502-1411 ***new***
Mail Stop 0446 (email) caldwell_at_heimdal.ucsf.edu
513 Parnassus Avenue
University of California
San Francisco, CA 94143-0446
------------------------------------------------------------------------
Received on Wed Nov 03 1999 - 11:42:00 PST
