Hi,
With the latest pmemd24.tar.bz2 I receive the following error using the command:
(pyenv) -----:~/sources/pmemd24_src$ ./update_pmemd --update --check-updates --download-patches --verbose 4
Checking for available patches online. This may take a few seconds...
Available Amber 24 patches:
update.1 (modifies pmemd.cuda)
Released on July 16, 2025 (written by Patricio Barletta)
Description:
      This fixes gridDim.x to support Blackwell GPUs such as RTX5090
update.2 (modifies pmemd)
Released on August 21, 2025 (written by David Case (from ))
Description:
      Allows compilation with plumed, by adding it to
      3rdPartyTools.cmake
update.3 (modifies pmemd.cuda)
Released on September 4, 2025 (written by David Clark)
Description:
      Adds some syncwarp() calls needed for NTP=1, barostat=1 runs
      on Blackwell GPUs
Looking for and downloading updates... please wait.
Downloading updates for Amber 24
Downloading Amber 24/update.1 (9.65 KB)
Downloading Amber 24/update.2 (1.09 KB)
Downloading Amber 24/update.3 (3.98 KB)
Preparing to apply updates... please wait.
Applying Amber 24/update.1
Applying Amber 24/update.2
Applying Amber 24/update.3
PatchingError: .patches/Amber24_Unapplied_Patches/update.3 failed to apply. No changes made from this patch
Any suggestions?
Can I continue with run_cmake?
Thanks.
Saverio Lemme
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Received on Mon Apr 20 2026 - 12:00:04 PDT
