[AMBER] pocket volume calculation

From: Sruthi Sudhakar via AMBER <amber.ambermd.org>
Date: Tue, 28 Nov 2023 18:44:22 +0530

Dear all,

We are working on an RNA-binding protein. During the simulation, the volume
of the groove that binds the RNA changes after a particular protein
mutation. Is there a way to quantify this pocket volume throughout the
trajectory? Any help is appreciated.

Sruthi Sudhakar
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Received on Thu Nov 30 2023 - 14:00:02 PST
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