Re: [AMBER] cpptraj and nastruct

From: David A Case via AMBER <amber.ambermd.org>
Date: Fri, 7 Jul 2023 11:49:24 -0400

On Thu, Jul 06, 2023, Jing Qu via AMBER wrote:
>
>I installed the version V6.19.5 (GitHub) OpenMP. As I have a parallel
>strand DNA with 24 residues, ideally I want the base pair parameters for
>every base pair,

I think Dan is correct about needing to see a structure. Parallel strand
duplexes may have never been tested, and it's not hard to imagine that they
could fool an algorithm trying to find "Watson-Crick" base pairs.

...dac


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Received on Fri Jul 07 2023 - 09:00:03 PDT
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