On Thu, Jul 06, 2023, Jing Qu via AMBER wrote:
>
>I installed the version V6.19.5 (GitHub) OpenMP. As I have a parallel
>strand DNA with 24 residues, ideally I want the base pair parameters for
>every base pair,
I think Dan is correct about needing to see a structure. Parallel strand
duplexes may have never been tested, and it's not hard to imagine that they
could fool an algorithm trying to find "Watson-Crick" base pairs.
...dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Jul 07 2023 - 09:00:03 PDT