Dear amber users,
I want to calculate the number of ions with respect to distance from the
DNA. I have a system consisting of many ions, I want a plot of,* ion
concentration vs distance* from dna.
Is there any way to do this in cpptraj ? , where we can increment the
distance from DNA in step wise say 1Å and corresponding this distance from
DNA we can get the number ions present and this must continue till bulk
reaches over the entire trajectory.
*-------------------------------------------------*
*With Regards*
*Angad Sharma*
*Research Scholar*
*School of Computational & Integrative Sciences*
*Jawaharlal Nehru University*
*New Delhi 110067, (INDIA)*
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Received on Tue Oct 18 2022 - 03:30:02 PDT
