Dear AmberTools users
I do have an issue when trying to install on my Intel Mac (macOS Monterey 12.6)
Despite many warnings during the installation everything goes to 100% but end up with
[100%] Linking CXX executable metatwist
Undefined symbols for architecture x86_64:
"boost::iostreams::detail::bzip2_base::end(bool, std::nothrow_t)", referenced from:
boost::iostreams::symmetric_filter<boost::iostreams::detail::bzip2_decompressor_impl<std::__1::allocator<char> >, std::__1::allocator<char> >::symmetric_filter<bool>(long, bool const&) in metatwist.cpp.o
boost::detail::shared_count::shared_count<boost::iostreams::symmetric_filter<boost::iostreams::detail::bzip2_decompressor_impl<std::__1::allocator<char> >, std::__1::allocator<char> >::impl>(boost::iostreams::symmetric_filter<boost::iostreams::detail::bzip2_decompressor_impl<std::__1::allocator<char> >, std::__1::allocator<char> >::impl*) in metatwist.cpp.o
boost::detail::sp_counted_impl_p<boost::iostreams::symmetric_filter<boost::iostreams::detail::bzip2_decompressor_impl<std::__1::allocator<char> >, std::__1::allocator<char> >::impl>::dispose() in metatwist.cpp.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [AmberTools/src/moft/metatwist] Error 1
make[1]: *** [AmberTools/src/moft/CMakeFiles/metatwist.dir/all] Error 2
make: *** [all] Error 2
Any idea of what causing such issue ? Maybe I have to update something.
For information I am using gFortran 12.2.0 from Homebrew maybe it is the cause and Amber may prefer a gFortran 11 flavor ?
Xavier
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Received on Tue Oct 18 2022 - 04:30:02 PDT
