Re: [AMBER] Amber20 CUDA installation error Centos 7

From: David A Case <>
Date: Fri, 24 Dec 2021 21:30:29 -0500

On Fri, Dec 24, 2021, Suguna Sakkiah wrote:

>/opt/miniconda3/bin/../lib/gcc/x86_64-conda-linux-gnu/9.3.0/../../../../x86_64-conda-linux-gnu/bin/ld: /usr/lib64/ undefined reference to `__strtold_nan.GLIBC_PRIVATE'
>collect2: error: ld returned 1 exit status

This looks like the same problem as before. You seem to be running GNU
compilers from a miniconda installation, and those seem to be incomopatible
somehow with what you have in /usr/lib64, which comes from the underlying

What do you get with "which gcc", "which gfortran", "gcc --version" and
"gfortran --version"?

Does your PATH include anything related to "/opt/miniconda3..."? If so, try
to get that out of your PATH, and use the compilers that CentOS provides.

Do you have friend who is good with Linux who can help you try to get around
these errors? Someone experienced with conda may be able to show you how to
deactivate a conda environment, if one is active. This sort of thing is
quite hard to track down one email at a are failing to compile
standard netCDF code, and it failing in ways no one here has ever seen


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Received on Fri Dec 24 2021 - 19:00:03 PST
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