[AMBER] Interaction energy by MM-PBSA for a superantigen with important Zn(II) center

From: SATYAJIT KHATUA <satyajitkhatua09.gmail.com>
Date: Fri, 19 Feb 2021 23:26:53 +0530

Dear Users,

I am calculating the protein-protein interaction energy for a superantigen
system. I am using MM-PBSA for that estimation. But, the problem is that I
have an important ZN (II) center through which the two fragment interacts.
When I have subjected the trajectory to binding energy estimation, it
couldn't able to detect the radius for the metal center. Any help in this
regard will be appreciated.

with regards,
Satyajit Khatua
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Received on Fri Feb 19 2021 - 10:00:02 PST
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