Re: [AMBER] free binding energy

From: Song, Lin <songlin3.chemistry.msu.edu>
Date: Tue, 8 Sep 2020 08:33:04 +0000

Hi,

FYI, here’re some related papers; https://pubs.acs.org/doi/abs/10.1021/ct400273t
https://pubs.acs.org/doi/abs/10.1021/acs.jctc.7b00660
https://pubs.acs.org/doi/abs/10.1021/acs.jctc.7b00706
Best,
Lin
On Sep 8, 2020, at 1:44 AM, Kehinde Idowu <kidowu93.yahoo.com<mailto:kidowu93.yahoo.com>> wrote:

Good day all,

Please, is it possible to calculate free binding energy on protein-protein MD simulations. If it is possible how, and if it is not, what other alternative can be exploit?


Kind regards
K Idowu
.....................................................................
Idowu Kehinde Ademola
Ph.D. Researcher,
Molecular Virology and Bio-Computation,
KwaZulu-Natal Research, Innovation and Sequencing Platform (KRISP)/Genomics Unit,
Nelson R Mandela School of Medicine, University of KwaZulu-Natal (UKZN), Durban, South Africa.
Emails: kidowu93.yahoo.com<mailto:kidowu93.yahoo.com>, 218068180.stu.ukzn.ac.za<mailto:218068180.stu.ukzn.ac.za>
Tel: +27 659508161, Skype: kidowu93

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Received on Tue Sep 08 2020 - 02:00:03 PDT
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